Os06g0294600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os06g0294600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 393.64 | 0.932 | 3.82 | -1.1 | 0.182 | -3.26 | -1.6 | 10.1 | 0.11 | 19.8 | 25.3 | 5207 | -- | -- |
| 424.02 | 0.959 | 4 | -1.18 | 0.0682 | -3.82 | 1.28 | -- | 0.166 | 7.7 | 19.7 | 25858 | -- | -- |
| 400.94 | 0.933 | 3.83 | -1.1 | 0.172 | -3.27 | -- | 9.88 | 0.0986 | 20.2 | 25.26 | 5227 | -- | -- |
| 417.82 | 0.952 | 3.96 | -0.239 | 0.147 | -4.71 | -- | -- | 0.502 | 16 | 19.4 | 26141 | -- | -- |
| 402.43 | 0.934 | 3.83 | -1.17 | -- | -3.24 | -- | 9.73 | 0.0852 | -- | 25.16 | 5283 | -- | -- |
| 684.2 | 1.23 | 4.33 | -5.16 | 0.00803 | -- | -1.41 | -- | -1.21 | 19.4 | -- | -- | -- | -- |
| 686.76 | 1.23 | 4.33 | -5.12 | 0.216 | -- | -- | -- | -1.21 | 13.7 | -- | -- | -- | -- |
| 417.89 | 0.952 | 3.94 | -0.155 | -- | -4.79 | -- | -- | 0.524 | -- | 19.4 | 27407 | -- | -- |
| 415.98 | 0.95 | 3.95 | -- | 0.123 | -4.98 | -- | -- | 0.52 | 15.1 | 18.91 | 27318 | -- | -- |
| 689.6 | 1.23 | 4.33 | -5.13 | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
| 1377.38 | 1.74 | 4.2 | -- | 0.312 | -- | -- | -- | -0.64 | 14.2 | -- | -- | -- | -- |
| 416.86 | 0.951 | 3.94 | -- | -- | -4.98 | -- | -- | 0.52 | -- | 18.93 | 27436 | -- | -- |
| 1383.17 | 1.74 | 4.21 | -- | -- | -- | -- | -- | -0.646 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 391.56 | wind | 5 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 2 | 397.49 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 12 | 397.79 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 13 | 397.82 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 14 | 398.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 21 | 398.97 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 25 | 399.64 | temperature | 15 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 26 | 399.79 | temperature | 15 | 14400 | > th | dose dependent | rect. | 2 | 3 |
| 28 | 399.88 | temperature | 15 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 38 | 400.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 15 |
| 43 | 400.42 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 44 | 400.44 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 46 | 400.49 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 65 | 400.76 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 67 | 400.80 | temperature | 15 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 68 | 400.87 | temperature | 30 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 75 | 400.99 | temperature | 25 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 77 | 401.00 | temperature | 15 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 78 | 401.01 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 93 | 401.31 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 15 |
| 158 | 402.27 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 181 | 402.60 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 16 |
| 191 | 402.75 | wind | 3 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 235 | 403.28 | radiation | 1 | 43200 | < th | dose dependent | sin | 15 | NA |
| 246 | 403.38 | temperature | 25 | 4320 | > th | dose independent | sin | 22 | NA |
| 296 | 403.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 376 | 404.44 | radiation | 1 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 385 | 404.48 | radiation | 1 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 386 | 404.48 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 437 | 404.73 | temperature | 25 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 454 | 404.82 | temperature | 25 | 4320 | < th | dose independent | sin | 22 | NA |
| 483 | 404.97 | wind | 3 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 506 | 405.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 535 | 405.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 548 | 405.40 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 15 |
| 551 | 405.43 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 10 |
| 560 | 405.44 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 17 |
| 600 | 405.59 | temperature | 30 | 4320 | < th | dose dependent | sin | 5 | NA |
| 625 | 405.71 | temperature | 15 | 4320 | > th | dose dependent | sin | 6 | NA |
| 649 | 405.82 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 11 |
| 656 | 405.87 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 770 | 406.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 12 | 22 |
| 845 | 406.47 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 22 |
| 848 | 406.50 | temperature | 15 | 4320 | > th | dose dependent | rect. | 13 | 20 |
| 965 | 406.78 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 9 |