Os06g0291500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0291500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.7 | 0.344 | 2.89 | 0.112 | 0.0129 | 0.807 | 0.202 | 3.69 | -0.048 | 9.26 | 6.673 | 799 | -- | -- |
| 54.86 | 0.345 | 2.86 | 0.0565 | 0.00615 | 0.0681 | -0.0841 | -- | -0.0433 | 20.8 | 5.7 | 2073 | -- | -- |
| 53.84 | 0.342 | 2.88 | 0.12 | 0.0123 | 0.805 | -- | 3.57 | -0.0472 | 9.07 | 6.741 | 798 | -- | -- |
| 54.77 | 0.345 | 2.85 | 0.0885 | 0.00615 | 0.136 | -- | -- | -0.0252 | 8.75 | 5.793 | 2267 | -- | -- |
| 53.85 | 0.342 | 2.88 | 0.118 | -- | 0.793 | -- | 3.57 | -0.0455 | -- | 6.8 | 798 | -- | -- |
| 54.97 | 0.348 | 2.86 | 0.0513 | 0.00149 | -- | 0.112 | -- | -0.0364 | 7.69 | -- | -- | -- | -- |
| 55 | 0.347 | 2.86 | 0.0536 | 0.0132 | -- | -- | -- | -0.0368 | 2.44 | -- | -- | -- | -- |
| 54.77 | 0.345 | 2.85 | 0.0881 | -- | 0.136 | -- | -- | -0.0246 | -- | 5.8 | 2267 | -- | -- |
| 54.95 | 0.345 | 2.85 | -- | 0.00107 | 0.0968 | -- | -- | -0.0354 | 9.67 | 5.979 | 2267 | -- | -- |
| 55.01 | 0.347 | 2.86 | 0.0541 | -- | -- | -- | -- | -0.0365 | -- | -- | -- | -- | -- |
| 55.07 | 0.347 | 2.86 | -- | 0.0142 | -- | -- | -- | -0.0428 | 2.5 | -- | -- | -- | -- |
| 54.95 | 0.345 | 2.86 | -- | -- | 0.0942 | -- | -- | -0.0362 | -- | 5.998 | 2267 | -- | -- |
| 55.08 | 0.346 | 2.86 | -- | -- | -- | -- | -- | -0.0425 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.96 | wind | 1.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 2 | 46.96 | wind | 1.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 11 | 50.81 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 12 | 50.91 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 13 | 50.95 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 15 | 50.96 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 20 | 51.00 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 23 | 51.00 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 25 | 51.01 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 26 | 51.02 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 27 | 51.02 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 31 | 51.03 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 32 | 51.03 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 35 | 51.03 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 39 | 51.03 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 41 | 51.03 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 46 | 51.03 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 47 | 51.03 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 49 | 51.03 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 54 | 51.03 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 59 | 51.10 | wind | 9.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 61 | 51.17 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 63 | 51.22 | wind | 9.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 65 | 51.27 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 88 | 51.63 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 90 | 51.66 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 92 | 51.68 | wind | 3.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 135 | 51.96 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 18 | 2 |
| 149 | 52.16 | wind | 9.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 162 | 52.24 | wind | 1.0 | 270 | < th | dose independent | rect. | 14 | 9 |
| 170 | 52.34 | wind | 3.0 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 171 | 52.35 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 179 | 52.42 | wind | 1.0 | 270 | < th | dose dependent | rect. | 14 | 9 |
| 219 | 52.82 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 15 | 1 |
| 221 | 52.82 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 225 | 52.84 | wind | 1.0 | 30 | < th | dose dependent | rect. | 22 | 3 |
| 249 | 52.94 | wind | 3.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 285 | 53.06 | wind | 9.0 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 288 | 53.07 | wind | 1.0 | 270 | < th | dose dependent | rect. | 21 | 2 |
| 300 | 53.10 | wind | 7.0 | 270 | > th | dose dependent | rect. | 19 | 1 |
| 315 | 53.15 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 336 | 53.20 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 11 |
| 338 | 53.21 | wind | 5.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 343 | 53.22 | wind | 9.0 | 1440 | < th | dose independent | rect. | 1 | 16 |
| 344 | 53.22 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 20 |
| 356 | 53.25 | wind | 1.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 371 | 53.27 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 379 | 53.28 | radiation | 10.0 | 720 | < th | dose independent | rect. | 11 | 1 |
| 384 | 53.29 | wind | 5.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 390 | 53.29 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 474 | 53.38 | atmosphere | 1010.0 | 720 | < th | dose independent | rect. | 12 | 9 |
| 480 | 53.39 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 485 | 53.39 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 487 | 53.40 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 500 | 53.40 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 514 | 53.41 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 532 | 53.41 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 547 | 53.42 | wind | 9.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 569 | 53.46 | humidity | 80.0 | 270 | > th | dose independent | rect. | 16 | 1 |
| 582 | 53.48 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 587 | 53.49 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 588 | 53.49 | atmosphere | 1010.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 593 | 53.50 | atmosphere | 1010.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 601 | 53.50 | atmosphere | 1010.0 | 10 | > th | dose independent | rect. | 23 | 1 |
| 908 | 53.50 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 931 | 53.51 | wind | 7.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 951 | 53.52 | atmosphere | 1010.0 | 10 | > th | dose independent | sin | 13 | NA |