Os06g0288200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os06g0288200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.4 | 0.652 | 7.18 | 0.0242 | 0.815 | -1.22 | 0.711 | 0.223 | -0.361 | 5.61 | 20.9 | 996 | -- | -- |
| 192.54 | 0.646 | 7.18 | -0.0157 | 0.822 | -1.24 | 0.717 | -- | -0.373 | 5.57 | 20.9 | 1003 | -- | -- |
| 193.62 | 0.648 | 7.18 | 0.0312 | 0.818 | -1.24 | -- | 0.215 | -0.361 | 5.54 | 20.88 | 995 | -- | -- |
| 193.75 | 0.648 | 7.18 | -0.0134 | 0.82 | -1.26 | -- | -- | -0.37 | 5.54 | 20.9 | 1003 | -- | -- |
| 224.41 | 0.698 | 7.19 | 0.0166 | -- | -1.21 | -- | 0.316 | -0.357 | -- | 20.77 | 620 | -- | -- |
| 236.76 | 0.721 | 7.25 | -0.533 | 0.831 | -- | 0.916 | -- | -0.678 | 6.3 | -- | -- | -- | -- |
| 238.83 | 0.724 | 7.25 | -0.522 | 0.835 | -- | -- | -- | -0.681 | 6.34 | -- | -- | -- | -- |
| 224.71 | 0.698 | 7.2 | -0.0491 | -- | -1.24 | -- | -- | -0.372 | -- | 20.7 | 629 | -- | -- |
| 193.75 | 0.648 | 7.18 | -- | 0.819 | -1.26 | -- | -- | -0.368 | 5.54 | 20.89 | 1003 | -- | -- |
| 275.01 | 0.775 | 7.27 | -0.5 | -- | -- | -- | -- | -0.663 | -- | -- | -- | -- | -- |
| 246 | 0.734 | 7.24 | -- | 0.828 | -- | -- | -- | -0.622 | 6.37 | -- | -- | -- | -- |
| 224.77 | 0.698 | 7.2 | -- | -- | -1.25 | -- | -- | -0.364 | -- | 20.71 | 630 | -- | -- |
| 281.59 | 0.783 | 7.25 | -- | -- | -- | -- | -- | -0.607 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 194.09 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 21 |
| 3 | 194.25 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 10 | 195.03 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 20 |
| 11 | 195.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 21 |
| 13 | 195.10 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 22 |
| 17 | 195.57 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 13 |
| 23 | 195.88 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 44 | 196.54 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 22 |
| 49 | 196.79 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 23 |
| 64 | 197.00 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 21 |
| 67 | 197.08 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 82 | 197.22 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 95 | 197.32 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 104 | 197.43 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 106 | 197.44 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 23 |
| 119 | 197.59 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 13 |
| 120 | 197.59 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 135 | 197.69 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 140 | 197.73 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 156 | 197.87 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 12 |
| 166 | 197.94 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 14 |
| 174 | 197.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 180 | 198.02 | temperature | 20 | 720 | < th | dose independent | rect. | 10 | 23 |
| 199 | 198.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 201 | 198.23 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 16 |
| 220 | 198.44 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 247 | 198.69 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 251 | 198.73 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 258 | 198.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 265 | 198.87 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 23 |
| 286 | 198.99 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 8 |
| 291 | 199.02 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 305 | 199.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 307 | 199.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 321 | 199.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 338 | 199.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 354 | 199.50 | wind | 9 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 362 | 199.53 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 369 | 199.58 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 396 | 199.71 | temperature | 25 | 720 | < th | dose dependent | sin | 2 | NA |
| 407 | 199.75 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 420 | 199.86 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 424 | 199.88 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 500 | 200.17 | wind | 7 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 502 | 200.18 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 18 |
| 507 | 200.19 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 517 | 200.23 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 537 | 200.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 661 | 200.69 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 677 | 200.72 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 688 | 200.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 698 | 200.81 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 714 | 200.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 723 | 200.87 | temperature | 30 | 90 | < th | dose dependent | sin | 5 | NA |
| 748 | 201.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 12 |
| 779 | 201.12 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 797 | 201.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 830 | 201.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 913 | 201.59 | humidity | 90 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 918 | 201.61 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 930 | 201.66 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 945 | 201.71 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 952 | 201.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 965 | 201.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |