Os06g0288100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor-like protein kinase.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0288100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Receptor-like protein kinase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.27 | 0.454 | 13.6 | 0.425 | 0.259 | 1.48 | 0.15 | -1.49 | 0.408 | 22.9 | 20 | 3830 | -- | -- |
| 93.41 | 0.45 | 13.6 | 0.296 | 0.282 | 2.14 | 0.122 | -- | 0.421 | 22.3 | 19 | 7240 | -- | -- |
| 93.36 | 0.45 | 13.6 | 0.42 | 0.259 | 1.48 | -- | -1.48 | 0.407 | 23 | 20.02 | 3824 | -- | -- |
| 91.52 | 0.446 | 13.6 | 0.283 | 0.277 | 2.22 | -- | -- | 0.437 | 23.2 | 18.7 | 8010 | -- | -- |
| 97.46 | 0.46 | 13.6 | 0.423 | -- | 1.5 | -- | -1.48 | 0.405 | -- | 20 | 3762 | -- | -- |
| 150.75 | 0.576 | 13.5 | 1.69 | 0.326 | -- | 0.052 | -- | 0.927 | 23.4 | -- | -- | -- | -- |
| 150.77 | 0.575 | 13.5 | 1.68 | 0.325 | -- | -- | -- | 0.927 | 23.4 | -- | -- | -- | -- |
| 96.43 | 0.457 | 13.6 | 0.218 | -- | 2.25 | -- | -- | 0.406 | -- | 18.88 | 8015 | -- | -- |
| 92.42 | 0.448 | 13.6 | -- | 0.288 | 2.3 | -- | -- | 0.368 | 23 | 18.66 | 9829 | -- | -- |
| 157.4 | 0.586 | 13.5 | 1.69 | -- | -- | -- | -- | 0.93 | -- | -- | -- | -- | -- |
| 225.6 | 0.703 | 13.5 | -- | 0.344 | -- | -- | -- | 0.739 | 23.7 | -- | -- | -- | -- |
| 97.25 | 0.459 | 13.6 | -- | -- | 2.35 | -- | -- | 0.368 | -- | 18.62 | 9526 | -- | -- |
| 233.06 | 0.713 | 13.5 | -- | -- | -- | -- | -- | 0.742 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.96 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 3 | 89.22 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 5 | 89.28 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 7 | 89.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 9 | 89.55 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 12 | 89.78 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 15 | 89.92 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 19 | 89.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 22 | 89.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 92 | 90.38 | radiation | 1 | 14400 | > th | dose independent | sin | 4 | NA |
| 93 | 90.40 | radiation | 1 | 14400 | < th | dose independent | sin | 4 | NA |
| 130 | 90.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 131 | 90.79 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 177 | 90.92 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 181 | 90.98 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 21 |
| 183 | 90.99 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 17 |
| 190 | 91.03 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 191 | 91.04 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 195 | 91.05 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 13 |
| 196 | 91.06 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 199 | 91.08 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 205 | 91.09 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 16 | 8 |
| 206 | 91.10 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 221 | 91.14 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 243 | 91.18 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 263 | 91.22 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 15 | NA |
| 294 | 91.24 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 377 | 91.32 | radiation | 1 | 14400 | < th | dose dependent | sin | 4 | NA |
| 406 | 91.34 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 5 | 19 |
| 445 | 91.36 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 471 | 91.37 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 483 | 91.37 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 19 | 22 |
| 506 | 91.38 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 22 | 23 |
| 526 | 91.40 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 641 | 91.49 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 673 | 91.52 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 695 | 91.54 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 728 | 91.57 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 741 | 91.58 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 751 | 91.59 | humidity | 60 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 777 | 91.60 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 788 | 91.60 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 15 |
| 852 | 91.65 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 910 | 91.69 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 16 |
| 934 | 91.73 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 4 | NA |
| 968 | 91.76 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 980 | 91.76 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 990 | 91.77 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 994 | 91.77 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 12 |