Os06g0286500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR disease resistance protein homologue.
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Os06g0286500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR disease resistance protein homologue.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.43 | 0.505 | 7.17 | 1.99 | 0.875 | 0.504 | -0.27 | 0.148 | -2.3 | 16.4 | 70.06 | 1446 | -- | -- |
| 115.47 | 0.5 | 7.17 | 2.01 | 0.876 | 0.512 | -0.279 | -- | -2.29 | 16.4 | 70.08 | 1445 | -- | -- |
| 115.62 | 0.501 | 7.17 | 1.99 | 0.874 | 0.5 | -- | 0.145 | -2.3 | 16.5 | 70 | 1445 | -- | -- |
| 115.66 | 0.501 | 7.17 | 2.01 | 0.872 | 0.503 | -- | -- | -2.29 | 16.5 | 70.28 | 1435 | -- | -- |
| 150.68 | 0.572 | 7.18 | 2 | -- | 0.648 | -- | 0.218 | -2.32 | -- | 70.02 | 1249 | -- | -- |
| 125.55 | 0.525 | 7.19 | 1.89 | 0.885 | -- | -0.131 | -- | -2.37 | 16.5 | -- | -- | -- | -- |
| 125.59 | 0.525 | 7.19 | 1.89 | 0.885 | -- | -- | -- | -2.37 | 16.5 | -- | -- | -- | -- |
| 150.04 | 0.571 | 7.16 | 2 | -- | 0.676 | -- | -- | -2.29 | -- | 71.04 | 1243 | -- | -- |
| 204.7 | 0.666 | 7.19 | -- | 0.828 | 0.878 | -- | -- | -2.36 | 16.6 | 70.03 | 8621 | -- | -- |
| 167.42 | 0.605 | 7.18 | 1.86 | -- | -- | -- | -- | -2.39 | -- | -- | -- | -- | -- |
| 220.04 | 0.694 | 7.23 | -- | 0.849 | -- | -- | -- | -2.58 | 16.6 | -- | -- | -- | -- |
| 201.29 | 0.661 | 7.24 | -- | -- | 1.5 | -- | -- | -2.67 | -- | 64.02 | 47520 | -- | -- |
| 258.55 | 0.751 | 7.23 | -- | -- | -- | -- | -- | -2.6 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.38 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 112.41 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 5 | 112.48 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 11 | 112.79 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 16 | 113.11 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 24 | 113.46 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 11 |
| 27 | 113.56 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 56 | 113.98 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 1 | 12 |
| 70 | 114.05 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 99 | 114.17 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 23 | 17 |
| 110 | 114.31 | humidity | 70.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 116 | 114.32 | radiation | 40.0 | 10 | < th | dose independent | rect. | 23 | 19 |
| 118 | 114.34 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 14 |
| 183 | 114.66 | radiation | 40.0 | 10 | < th | dose independent | rect. | 23 | 17 |
| 192 | 114.71 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 196 | 114.74 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 200 | 114.77 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 202 | 114.79 | wind | 1.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 220 | 114.83 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 223 | 114.84 | wind | 1.0 | 720 | > th | dose independent | rect. | 4 | 5 |
| 230 | 114.89 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 266 | 115.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 276 | 115.05 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 277 | 115.05 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 280 | 115.06 | humidity | 70.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 297 | 115.09 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 298 | 115.09 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 17 |
| 299 | 115.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 304 | 115.10 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 306 | 115.11 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 307 | 115.11 | humidity | 70.0 | 30 | > th | dose independent | rect. | 23 | 19 |
| 324 | 115.13 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 326 | 115.13 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 380 | 115.21 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 382 | 115.21 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 397 | 115.24 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 407 | 115.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 435 | 115.31 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 458 | 115.33 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 481 | 115.36 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 493 | 115.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 18 |
| 495 | 115.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 498 | 115.36 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 23 | 19 |
| 506 | 115.37 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 8 | 14 |
| 509 | 115.38 | radiation | 20.0 | 10 | > th | dose dependent | sin | 6 | NA |
| 536 | 115.41 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 24 | 20 |
| 541 | 115.42 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 542 | 115.42 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 546 | 115.42 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 556 | 115.42 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 580 | 115.43 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |
| 615 | 115.44 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 628 | 115.44 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 651 | 115.45 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 8 | 18 |
| 652 | 115.46 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 679 | 115.49 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 699 | 115.50 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 16 | 22 |
| 760 | 115.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 787 | 115.57 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 818 | 115.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 839 | 115.60 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 847 | 115.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 852 | 115.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 870 | 115.63 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 931 | 115.67 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 18 |
| 962 | 115.70 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 18 | 20 |
| 965 | 115.71 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 13 |
| 982 | 115.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 985 | 115.73 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 986 | 115.73 | radiation | 40.0 | 10 | < th | dose independent | rect. | 8 | 10 |
| 999 | 115.74 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |