Os06g0285200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Leafy cotyledon 1-like L1L protein.
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Os06g0285200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Leafy cotyledon 1-like L1L protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.58 | 0.512 | 2.87 | -0.00629 | 0.0529 | 0.275 | 0.155 | 2.48 | 0.174 | 15.8 | 0.9497 | 79 | -- | -- |
| 121.52 | 0.513 | 2.89 | -0.0843 | 0.0607 | 0.58 | -0.0429 | -- | 0.169 | 15.9 | 0.9981 | 82 | -- | -- |
| 118.64 | 0.507 | 2.87 | -0.00364 | 0.0507 | 0.273 | -- | 2.46 | 0.174 | 15.9 | 0.9647 | 78 | -- | -- |
| 121.47 | 0.513 | 2.89 | -0.087 | 0.0946 | 0.63 | -- | -- | 0.178 | 16.7 | 0.9668 | 82 | -- | -- |
| 118.76 | 0.508 | 2.87 | 0.00197 | -- | 0.223 | -- | 2.53 | 0.169 | -- | 0.9999 | 78 | -- | -- |
| 126.42 | 0.527 | 2.9 | 0.00521 | 0.0433 | -- | 0.273 | -- | 0.138 | 4.06 | -- | -- | -- | -- |
| 126.63 | 0.527 | 2.9 | 0.00206 | 0.0464 | -- | -- | -- | 0.137 | 4.75 | -- | -- | -- | -- |
| 121.73 | 0.514 | 2.89 | -0.0769 | -- | 0.595 | -- | -- | 0.176 | -- | 0.9 | 90 | -- | -- |
| 121.63 | 0.514 | 2.89 | -- | 0.0886 | 0.609 | -- | -- | 0.188 | 16.7 | 0.9662 | 79 | -- | -- |
| 126.75 | 0.526 | 2.9 | 0.00381 | -- | -- | -- | -- | 0.138 | -- | -- | -- | -- | -- |
| 126.63 | 0.526 | 2.9 | -- | 0.0464 | -- | -- | -- | 0.137 | 4.75 | -- | -- | -- | -- |
| 121.89 | 0.514 | 2.89 | -- | -- | 0.574 | -- | -- | 0.179 | -- | 0.8957 | 90 | -- | -- |
| 126.75 | 0.525 | 2.9 | -- | -- | -- | -- | -- | 0.138 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.94 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 5 | 103.94 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 11 | 107.83 | wind | 1.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 19 | 109.32 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 23 | 1 |
| 30 | 109.32 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 23 | 1 |
| 84 | 113.85 | wind | 1.0 | 90 | < th | dose dependent | rect. | 17 | 7 |
| 96 | 113.96 | wind | 1.0 | 90 | < th | dose dependent | rect. | 14 | 10 |
| 110 | 114.59 | wind | 1.0 | 90 | < th | dose dependent | rect. | 10 | 14 |
| 114 | 114.66 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 2 |
| 115 | 114.76 | wind | 1.0 | 90 | < th | dose independent | rect. | 14 | 10 |
| 116 | 114.77 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 8 |
| 148 | 115.21 | wind | 1.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 149 | 115.22 | wind | 1.0 | 90 | < th | dose independent | rect. | 10 | 14 |
| 161 | 115.43 | wind | 1.0 | 90 | < th | dose independent | sin | 15 | NA |
| 186 | 115.73 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 193 | 115.79 | wind | 1.0 | 10 | < th | dose independent | sin | 15 | NA |
| 213 | 115.94 | wind | 1.0 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 231 | 116.17 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 16 |
| 257 | 116.40 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 14 |
| 264 | 116.45 | wind | 1.0 | 90 | > th | dose independent | sin | 15 | NA |
| 274 | 116.61 | wind | 1.0 | 1440 | > th | dose independent | rect. | 22 | 2 |
| 276 | 116.61 | wind | 1.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 285 | 116.70 | wind | 1.0 | 90 | < th | dose independent | rect. | 14 | 15 |
| 308 | 116.79 | wind | 1.0 | 90 | < th | dose independent | rect. | 10 | 19 |
| 349 | 117.08 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 14 |
| 446 | 117.68 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 20 |
| 473 | 117.79 | wind | 1.0 | 90 | < th | dose independent | rect. | 14 | 22 |
| 480 | 117.81 | wind | 1.0 | 90 | < th | dose independent | rect. | 17 | 19 |
| 564 | 118.11 | wind | 1.0 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 578 | 118.19 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 596 | 118.24 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 1 |
| 597 | 118.24 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 610 | 118.30 | wind | 1.0 | 90 | > th | dose independent | rect. | 13 | 22 |
| 665 | 118.47 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 20 |
| 675 | 118.48 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 18 |
| 689 | 118.49 | wind | 1.0 | 90 | < th | dose dependent | rect. | 22 | 14 |
| 715 | 118.54 | wind | 1.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 790 | 118.68 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 799 | 118.70 | wind | 1.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 816 | 118.74 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 819 | 118.74 | wind | 1.0 | 10 | < th | dose dependent | rect. | 22 | 14 |
| 839 | 118.77 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 13 |
| 873 | 118.85 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 882 | 118.85 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 904 | 118.88 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 23 | 1 |
| 942 | 118.94 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 973 | 118.94 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |