Os06g0282000 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0282000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	4.8	(0.0372)	R²	:	0.458
β₁	:	0.707	(0.136)	R²_dD	:	0.0331	R²_D	:	0.0512
β₂	:	1.13	(0.0993)	R²_dC	:	0.163	R²_C	:	0.228
β₃	:	2.88	(0.259)	R²_dE	:	0.157	R²_E	:	0.246
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.221	(0.0801)	R²_dN8	:	0.0114	R²_N8	:	0.0241
σ	:	0.694
deviance	:	221.86
__

_____

C
peak time of C	:	5.72
E
wheather	:	humidity
threshold	:	92.79
memory length	:	561
response mode	:	> th
dose dependency	:	dose dependent
G
type of G	:	rect.
peak or start time of G	:	20.7
open length of G	:	3.98

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
209.58	0.68	4.79	0.896	1.18	2.27	-0.288	-3.99	-0.176	5.76	92.01	624	20.2	2.93
218.13	0.688	4.81	0.754	1.15	2.8	-1.22	--	-0.21	5.64	92.75	564	20.7	3.92
209.74	0.675	4.79	0.892	1.18	2.29	--	-4.04	-0.17	5.75	92	620	20.2	2.97
221.86	0.694	4.8	0.707	1.13	2.88	--	--	-0.221	5.72	92.79	561	20.7	3.98
269.13	0.764	4.81	0.839	--	3.11	--	-3.07	-0.0765	--	91.84	558	20.7	4.5
276.77	0.78	4.82	0.762	1.39	--	-1.06	--	-0.341	5.18	--	--	--	--
279.58	0.783	4.82	0.762	1.38	--	--	--	-0.336	5.2	--	--	--	--
279.45	0.779	4.79	0.713	--	3.26	--	--	-0.0864	--	92.18	558	20.7	4.62
235.14	0.714	4.8	--	1.14	2.94	--	--	-0.256	5.76	92.75	561	20.6	4.01
379.56	0.91	4.84	0.811	--	--	--	--	-0.301	--	--	--	--	--
294.89	0.803	4.84	--	1.4	--	--	--	-0.42	5.18	--	--	--	--
292.16	0.796	4.81	--	--	3.25	--	--	-0.163	--	92.02	557	20.7	4.7
396.89	0.93	4.86	--	--	--	--	--	-0.391	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	221.91	humidity	90	720	> th	dose dependent	rect.	20	3
2	222.03	humidity	90	720	> th	dose dependent	rect.	20	1
4	222.73	temperature	25	720	> th	dose independent	rect.	15	10
12	224.03	temperature	25	720	< th	dose independent	rect.	15	7
26	225.27	radiation	1	720	< th	dose dependent	rect.	15	9
38	225.74	temperature	25	720	> th	dose independent	sin	16	NA
67	227.33	temperature	25	720	< th	dose independent	sin	16	NA
79	227.74	temperature	25	720	< th	dose independent	rect.	14	15
88	228.34	radiation	1	720	< th	dose independent	rect.	15	9
112	229.30	temperature	20	720	> th	dose dependent	rect.	16	9
128	229.63	radiation	1	720	> th	dose independent	rect.	15	4
182	230.60	temperature	30	270	< th	dose dependent	rect.	14	17
184	230.69	radiation	1	720	< th	dose dependent	sin	15	NA
201	231.30	temperature	20	720	> th	dose dependent	rect.	16	5
205	231.35	temperature	30	90	< th	dose dependent	rect.	17	16
237	232.06	temperature	20	270	> th	dose dependent	rect.	20	8
265	232.85	radiation	1	1440	> th	dose independent	rect.	11	8
280	232.97	radiation	1	1440	< th	dose dependent	rect.	11	14
284	232.99	radiation	1	1440	< th	dose dependent	rect.	11	12
285	233.00	radiation	1	1440	< th	dose dependent	rect.	11	8
286	233.00	radiation	1	1440	< th	dose dependent	rect.	11	16
307	233.11	temperature	20	270	> th	dose dependent	sin	11	NA
311	233.15	temperature	30	720	< th	dose dependent	rect.	19	3
337	233.26	radiation	1	1440	< th	dose independent	rect.	11	12
338	233.26	radiation	1	1440	< th	dose independent	rect.	11	14
339	233.27	radiation	1	1440	< th	dose independent	rect.	11	8
344	233.28	radiation	1	1440	< th	dose independent	rect.	11	16
364	233.42	radiation	1	1440	< th	dose independent	rect.	13	6
370	233.43	radiation	1	1440	< th	dose independent	rect.	13	14
426	233.71	temperature	30	90	< th	dose dependent	rect.	19	14
437	233.85	radiation	1	720	> th	dose independent	sin	15	NA
455	234.07	temperature	30	720	< th	dose dependent	rect.	17	5
509	234.51	radiation	1	1440	> th	dose independent	sin	17	NA
510	234.51	radiation	1	720	< th	dose independent	sin	15	NA
542	234.89	radiation	1	1440	< th	dose independent	sin	17	NA
697	236.30	temperature	30	720	< th	dose dependent	rect.	21	1
703	236.39	temperature	25	270	< th	dose dependent	rect.	23	7
727	236.57	temperature	20	720	> th	dose dependent	sin	16	NA
760	236.81	temperature	10	720	> th	dose dependent	rect.	15	10
817	237.12	temperature	30	270	< th	dose dependent	rect.	21	10
961	238.04	wind	5	4320	< th	dose independent	rect.	14	1