Os06g0280900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0280900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.94 | 0.43 | 8.73 | 0.88 | 1.16 | -1.2 | 0.411 | 1.22 | 0.181 | 20 | 25.1 | 252 | 3.25 | 8.15 |
| 85.86 | 0.432 | 8.71 | 0.999 | 1.17 | -1.19 | -0.762 | -- | 0.223 | 20.1 | 25.09 | 231 | 3.32 | 8.2 |
| 84.13 | 0.427 | 8.73 | 0.894 | 1.17 | -1.19 | -- | 1.01 | 0.179 | 20 | 25 | 248 | 3.32 | 8.22 |
| 87.6 | 0.436 | 8.71 | 1.01 | 1.18 | -1.17 | -- | -- | 0.222 | 20.1 | 25.07 | 232 | 3.33 | 8.2 |
| 114 | 0.497 | 8.69 | 0.938 | -- | -1.39 | -- | 1.05 | 0.219 | -- | 29.2 | 153 | 3.11 | 9.62 |
| 119.66 | 0.513 | 8.7 | 1.14 | 1.94 | -- | -1.05 | -- | 0.391 | 20.3 | -- | -- | -- | -- |
| 123.1 | 0.52 | 8.7 | 1.17 | 1.95 | -- | -- | -- | 0.391 | 20.3 | -- | -- | -- | -- |
| 112.74 | 0.495 | 8.68 | 1.08 | -- | -1.53 | -- | -- | 0.283 | -- | 29.19 | 177 | 2.83 | 9.48 |
| 114.28 | 0.498 | 8.71 | -- | 1.16 | -1.23 | -- | -- | 0.154 | 19.9 | 25.11 | 229 | 3.62 | 7.98 |
| 332.98 | 0.853 | 8.65 | 1.16 | -- | -- | -- | -- | 0.369 | -- | -- | -- | -- | -- |
| 159.42 | 0.591 | 8.73 | -- | 1.94 | -- | -- | -- | 0.26 | 20.3 | -- | -- | -- | -- |
| 135.11 | 0.541 | 8.73 | -- | -- | -1.98 | -- | -- | 0.159 | -- | 25.3 | 407 | 1.91 | 8.84 |
| 368.5 | 0.896 | 8.67 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.79 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 8 |
| 11 | 89.48 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 6 |
| 24 | 90.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 32 | 91.22 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 6 |
| 40 | 91.63 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 3 |
| 43 | 91.77 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 13 |
| 47 | 91.87 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 8 |
| 52 | 92.07 | temperature | 25 | 270 | > th | dose independent | sin | 4 | NA |
| 56 | 92.16 | temperature | 25 | 270 | < th | dose independent | sin | 4 | NA |
| 69 | 92.56 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 10 |
| 86 | 92.90 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 93 | 93.04 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 123 | 93.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 194 | 95.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 13 |
| 237 | 95.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 260 | 95.88 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 4 |
| 345 | 96.76 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 356 | 96.86 | temperature | 30 | 270 | < th | dose dependent | sin | 4 | NA |
| 388 | 97.19 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 477 | 98.03 | temperature | 25 | 10 | > th | dose dependent | sin | 2 | NA |
| 701 | 99.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 3 |
| 807 | 100.03 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 8 |
| 921 | 100.58 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 14 |
| 925 | 100.60 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 12 |
| 944 | 100.68 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 1 |