Os06g0279600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os06g0279600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.07 | 0.708 | 10.5 | 1.08 | 2.07 | -1.14 | -0.778 | 5.1 | -5.73 | 21 | 25 | 7 | 6.4 | -- |
| 243.42 | 0.727 | 10.6 | 0.354 | 2.1 | -1.09 | -0.188 | -- | -5.91 | 21 | 25.1 | 16 | 6.35 | -- |
| 228.49 | 0.709 | 10.5 | 1.08 | 2.07 | -1.12 | -- | 4.91 | -5.75 | 21 | 25 | 7 | 6.4 | -- |
| 241.8 | 0.724 | 10.6 | 0.355 | 2.21 | -1.18 | -- | -- | -5.99 | 20.7 | 25.69 | 59 | 7.25 | -- |
| 402.89 | 0.94 | 10.6 | 0.583 | -- | 0.486 | -- | 2.78 | -6.31 | -- | 24.9 | 3 | 8.86 | -- |
| 273.48 | 0.775 | 10.6 | 0.214 | 1.65 | -- | -0.293 | -- | -6.3 | 21 | -- | -- | -- | -- |
| 273.78 | 0.775 | 10.6 | 0.224 | 1.65 | -- | -- | -- | -6.3 | 21 | -- | -- | -- | -- |
| 273.78 | 0.771 | 10.6 | 0.224 | -- | 1.65 | -- | -- | -6.3 | -- | 2.323 | 3 | 9.03 | -- |
| 244.43 | 0.728 | 10.6 | -- | 2.16 | -1.14 | -- | -- | -6.05 | 20.8 | 25.7 | 61 | 7.01 | -- |
| 429.36 | 0.968 | 10.6 | 0.226 | -- | -- | -- | -- | -6.31 | -- | -- | -- | -- | -- |
| 275.1 | 0.776 | 10.7 | -- | 1.65 | -- | -- | -- | -6.32 | 21 | -- | -- | -- | -- |
| 275.1 | 0.772 | 10.6 | -- | -- | 1.65 | -- | -- | -6.32 | -- | 0.8767 | 6 | 9.05 | -- |
| 430.71 | 0.969 | 10.6 | -- | -- | -- | -- | -- | -6.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 228.05 | temperature | 25.0 | 10 | > th | dose independent | sin | 12 | NA |
| 5 | 229.27 | temperature | 25.0 | 30 | > th | dose independent | rect. | 16 | 14 |
| 9 | 232.47 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 18 | 235.05 | temperature | 25.0 | 30 | < th | dose independent | rect. | 13 | 15 |
| 20 | 235.32 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 10 |
| 22 | 235.33 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 32 | 236.03 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 34 | 236.11 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 12 |
| 43 | 236.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 48 | 237.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 54 | 237.53 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 73 | 238.43 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 74 | 238.48 | temperature | 25.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 75 | 238.64 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 10 |
| 85 | 239.02 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 86 | 239.04 | wind | 9.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 101 | 239.50 | temperature | 25.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 102 | 239.52 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 5 |
| 103 | 239.58 | radiation | 40.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 106 | 239.69 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 2 |
| 110 | 239.93 | temperature | 30.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 114 | 240.02 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 127 | 240.47 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 2 |
| 139 | 240.72 | temperature | 25.0 | 30 | < th | dose independent | sin | 13 | NA |
| 145 | 240.93 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 3 |
| 154 | 241.18 | wind | 9.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 156 | 241.23 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 180 | 241.70 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 10 | 3 |
| 183 | 241.76 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 190 | 241.84 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 213 | 242.20 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 12 |
| 219 | 242.33 | temperature | 25.0 | 30 | > th | dose independent | rect. | 18 | 8 |
| 254 | 242.75 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 10 |
| 261 | 242.85 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 13 | 23 |
| 262 | 242.85 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 272 | 243.00 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 8 |
| 273 | 243.02 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 319 | 243.62 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 322 | 243.72 | radiation | 40.0 | 720 | > th | dose independent | rect. | 13 | 20 |
| 333 | 243.85 | temperature | 30.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 388 | 244.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 392 | 244.54 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 395 | 244.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 409 | 244.71 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 419 | 244.84 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 10 | 6 |
| 441 | 245.18 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 446 | 245.24 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 461 | 245.35 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 10 | 5 |
| 466 | 245.41 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 476 | 245.52 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 481 | 245.55 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 496 | 245.66 | radiation | 40.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 516 | 245.81 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 517 | 245.82 | wind | 7.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 521 | 245.87 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 528 | 245.92 | humidity | 90.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 534 | 245.96 | radiation | 20.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 538 | 245.98 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 541 | 246.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 543 | 246.00 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 545 | 246.00 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 546 | 246.00 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 1 |
| 547 | 246.00 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 548 | 246.00 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 553 | 246.02 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 13 | 2 |
| 561 | 246.10 | wind | 9.0 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 570 | 246.14 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 576 | 246.22 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 601 | 246.35 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 16 |
| 610 | 246.41 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 5 |
| 622 | 246.51 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 623 | 246.52 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 6 |
| 645 | 246.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 8 |
| 646 | 246.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 8 |
| 655 | 246.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 16 |
| 656 | 246.75 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 677 | 246.82 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 8 |
| 684 | 246.85 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 8 |
| 686 | 246.85 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 8 |
| 687 | 246.85 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 8 |
| 688 | 246.85 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 16 |
| 696 | 246.93 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 16 |
| 697 | 246.93 | temperature | 20.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 712 | 247.09 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 5 |
| 735 | 247.15 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 739 | 247.17 | temperature | 25.0 | 90 | > th | dose dependent | sin | 12 | NA |
| 743 | 247.21 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 2 |
| 755 | 247.28 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 8 |
| 758 | 247.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 765 | 247.34 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 16 |
| 789 | 247.47 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 12 | 16 |
| 818 | 247.62 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 18 | 11 |
| 848 | 247.77 | temperature | 30.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 874 | 247.90 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 18 | 12 |
| 884 | 247.95 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 22 |
| 889 | 247.99 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 10 |
| 907 | 248.09 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 18 | 7 |
| 921 | 248.21 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 16 |
| 923 | 248.21 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 16 | 7 |
| 925 | 248.21 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 16 |
| 933 | 248.28 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 938 | 248.34 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 8 |
| 949 | 248.39 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 22 |
| 972 | 248.50 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 981 | 248.55 | wind | 9.0 | 4320 | < th | dose independent | rect. | 23 | 17 |
| 991 | 248.60 | wind | 9.0 | 4320 | > th | dose dependent | sin | 1 | NA |