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Os06g0274500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to SERK1 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.019) R2 : 0.651
β1 : 1.43 (0.0696) R2dD : 0.337 R2D : 0.195
β2 : 0.741 (0.0458) R2dC : 0.202 R2C : 0.145
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.658 (0.0406) R2dN8 : 0.27 R2N8 : 0.108
σ : 0.357
deviance : 58.28
__
_____
C
peak time of C : 22.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.35 0.327 11.7 1.37 0.646 -0.437 0.87 -0.0644 0.733 22.4 10.03 4325 -- --
46.66 0.318 11.7 1.45 0.572 -0.641 0.77 -- 0.819 22.7 10.57 4281 -- --
50.24 0.33 11.7 1.36 0.623 -0.548 -- -0.00997 0.731 22.4 10.47 4283 -- --
49.79 0.329 11.7 1.39 0.598 -0.597 -- -- 0.803 22.3 10.57 4302 -- --
69.96 0.39 11.7 1.38 -- -0.724 -- -0.0345 0.835 -- 11.18 4390 -- --
55.67 0.35 11.7 1.46 0.743 -- 0.804 -- 0.66 22.4 -- -- -- --
58.28 0.357 11.7 1.43 0.741 -- -- -- 0.658 22.3 -- -- -- --
68.75 0.386 11.6 1.44 -- -0.899 -- -- 0.871 -- 11.02 4390 -- --
86.13 0.432 11.8 -- 0.708 -0.854 -- -- 0.621 22.7 8.437 12460 -- --
91.75 0.448 11.7 1.44 -- -- -- -- 0.66 -- -- -- -- --
112.37 0.496 11.7 -- 0.749 -- -- -- 0.498 22.5 -- -- -- --
115.06 0.5 11.8 -- -- -0.898 -- -- 0.312 -- 6.7 47520 -- --
146.76 0.565 11.7 -- -- -- -- -- 0.5 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.20 wind 9 4320 > th dose dependent rect. 12 2
7 48.09 wind 9 4320 > th dose independent rect. 13 1
8 48.13 wind 9 4320 > th dose dependent rect. 3 13
10 48.14 temperature 20 720 > th dose dependent rect. 3 4
21 48.25 temperature 25 720 < th dose dependent rect. 4 3
27 48.34 wind 9 4320 < th dose independent rect. 13 1
31 48.39 temperature 25 720 < th dose dependent rect. 4 1
33 48.40 temperature 20 720 > th dose dependent rect. 6 1
64 48.58 atmosphere 1005 720 < th dose independent rect. 17 1
69 48.60 wind 9 4320 > th dose independent rect. 13 3
71 48.62 atmosphere 1005 720 > th dose independent rect. 15 4
78 48.67 wind 7 4320 > th dose dependent rect. 15 1
88 48.73 temperature 20 720 > th dose dependent rect. 23 10
96 48.78 temperature 20 720 < th dose independent rect. 4 3
98 48.78 temperature 30 720 < th dose dependent rect. 1 8
100 48.82 wind 9 4320 > th dose independent rect. 15 1
130 48.97 wind 9 4320 > th dose dependent sin 4 NA
144 49.02 wind 9 4320 > th dose independent rect. 3 13
146 49.02 temperature 10 30 > th dose dependent rect. 12 23
151 49.05 temperature 25 10 > th dose independent rect. 6 5
179 49.17 wind 9 4320 < th dose independent rect. 15 1
195 49.24 temperature 25 270 < th dose independent rect. 7 8
206 49.27 temperature 20 30 > th dose dependent rect. 12 23
207 49.28 temperature 20 720 > th dose independent rect. 3 4
218 49.33 atmosphere 1005 720 > th dose independent rect. 11 8
221 49.33 temperature 15 30 > th dose dependent rect. 6 16
226 49.35 temperature 25 270 < th dose independent rect. 7 6
258 49.44 temperature 15 30 > th dose dependent rect. 6 14
260 49.45 atmosphere 1005 270 > th dose independent rect. 11 14
261 49.45 atmosphere 1005 30 > th dose independent rect. 11 16
266 49.45 temperature 10 720 > th dose dependent rect. 21 14
284 49.49 temperature 25 270 < th dose independent rect. 7 4
298 49.51 temperature 30 270 < th dose dependent rect. 7 9
299 49.51 atmosphere 995 30 > th dose dependent rect. 11 19
311 49.54 atmosphere 1005 270 > th dose independent rect. 9 17
324 49.58 temperature 20 30 > th dose dependent rect. 6 5
335 49.61 wind 3 720 > th dose independent rect. 2 1
340 49.62 wind 9 4320 < th dose independent rect. 24 16
343 49.63 temperature 10 720 > th dose dependent sin 8 NA
344 49.64 atmosphere 1005 720 > th dose independent rect. 9 12
348 49.65 atmosphere 1005 270 > th dose independent sin 18 NA
353 49.66 wind 9 4320 < th dose independent rect. 3 13
367 49.68 temperature 20 30 > th dose dependent rect. 4 7
395 49.71 atmosphere 995 30 > th dose dependent rect. 11 16
414 49.75 temperature 30 720 < th dose dependent sin 6 NA
428 49.78 wind 9 4320 > th dose independent sin 3 NA
492 49.86 temperature 25 1440 > th dose dependent rect. 15 1
529 49.91 radiation 20 720 > th dose independent rect. 16 1
598 49.99 wind 9 4320 < th dose independent rect. 8 8
613 50.00 temperature 25 30 > th dose independent rect. 1 10
632 50.02 radiation 30 720 > th dose independent rect. 14 19
646 50.04 radiation 30 720 < th dose independent rect. 3 21
658 50.07 radiation 10 1440 < th dose independent rect. 17 3
660 50.07 temperature 20 720 > th dose independent rect. 23 10
665 50.07 temperature 20 270 > th dose dependent rect. 3 17
686 50.10 temperature 20 720 > th dose independent rect. 6 1
706 50.11 atmosphere 1005 30 > th dose independent rect. 11 19
719 50.12 wind 9 4320 > th dose dependent rect. 13 19
723 50.13 radiation 10 1440 < th dose independent rect. 17 5
725 50.13 radiation 10 1440 < th dose independent rect. 17 12
736 50.14 wind 9 43200 < th dose independent rect. 19 6
737 50.14 radiation 10 1440 < th dose independent rect. 17 7
738 50.14 wind 9 43200 > th dose independent rect. 19 8
747 50.15 wind 9 43200 > th dose independent rect. 19 6
776 50.16 radiation 20 720 > th dose dependent rect. 14 19
782 50.17 wind 9 43200 < th dose independent rect. 19 8
814 50.20 radiation 30 720 > th dose independent sin 13 NA
817 50.20 temperature 20 720 > th dose independent rect. 23 8
822 50.20 wind 9 43200 > th dose dependent rect. 19 7
842 50.23 radiation 10 1440 < th dose independent rect. 17 9
848 50.23 temperature 20 30 > th dose dependent rect. 1 10
885 50.26 radiation 30 720 < th dose independent rect. 5 19
896 50.26 radiation 40 720 < th dose dependent rect. 3 20
902 50.27 radiation 1 43200 < th dose dependent rect. 23 1
921 50.29 temperature 10 1440 > th dose independent rect. 12 1
925 50.29 atmosphere 995 1440 > th dose independent rect. 12 1
934 50.29 temperature 10 1440 > th dose independent rect. 13 23
953 50.30 radiation 40 720 < th dose dependent rect. 5 18
965 50.32 wind 1 30 > th dose independent rect. 11 1
966 50.32 atmosphere 1005 270 > th dose independent rect. 13 13
975 50.33 humidity 50 30 > th dose independent rect. 11 1
981 50.33 humidity 70 43200 > th dose dependent rect. 4 10
987 50.34 atmosphere 1000 30 > th dose independent rect. 11 1
993 50.34 radiation 30 720 < th dose independent rect. 19 22