Os06g0273500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os06g0273500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.47 | 0.374 | 8.52 | 0.235 | 1.31 | -1.68 | 0.99 | 2.72 | 0.0606 | 1.28 | 21.1 | 415 | -- | -- |
| 70.1 | 0.39 | 8.57 | -0.0529 | 1.5 | -1.53 | 0.989 | -- | -0.0193 | 1.34 | 19.14 | 586 | -- | -- |
| 67.12 | 0.382 | 8.52 | 0.212 | 1.39 | -1.65 | -- | 2.68 | 0.0512 | 1.34 | 20.74 | 475 | -- | -- |
| 70.55 | 0.391 | 8.58 | -0.361 | 1.34 | -1.47 | -- | -- | -0.106 | 1.57 | 20.4 | 402 | -- | -- |
| 123.01 | 0.517 | 8.49 | 0.279 | -- | -2.55 | -- | 1.97 | 0.178 | -- | 20.98 | 117 | -- | -- |
| 107.15 | 0.485 | 8.63 | -0.663 | 1.64 | -- | 0.735 | -- | -0.355 | 2.66 | -- | -- | -- | -- |
| 109 | 0.489 | 8.63 | -0.682 | 1.65 | -- | -- | -- | -0.359 | 2.73 | -- | -- | -- | -- |
| 121.38 | 0.513 | 8.53 | -0.111 | -- | -2.44 | -- | -- | 0.0769 | -- | 20.57 | 89 | -- | -- |
| 73.25 | 0.399 | 8.57 | -- | 1.3 | -1.58 | -- | -- | -0.0456 | 1.45 | 19.96 | 408 | -- | -- |
| 266.54 | 0.763 | 8.62 | -0.612 | -- | -- | -- | -- | -0.318 | -- | -- | -- | -- | -- |
| 121.26 | 0.515 | 8.61 | -- | 1.63 | -- | -- | -- | -0.284 | 2.72 | -- | -- | -- | -- |
| 121.69 | 0.514 | 8.53 | -- | -- | -2.47 | -- | -- | 0.0941 | -- | 20.46 | 87 | -- | -- |
| 276.41 | 0.776 | 8.6 | -- | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 4 | 63.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 5 | 63.75 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 38 | 65.28 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 22 |
| 44 | 65.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 15 |
| 68 | 65.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 70 | 65.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 91 | 65.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 9 |
| 92 | 65.90 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 132 | 66.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 154 | 66.33 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 265 | 66.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 286 | 66.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 10 |
| 294 | 66.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 314 | 66.87 | temperature | 20 | 270 | > th | dose dependent | sin | 21 | NA |
| 340 | 66.92 | temperature | 20 | 720 | > th | dose dependent | sin | 2 | NA |
| 784 | 67.59 | temperature | 10 | 720 | > th | dose dependent | sin | 1 | NA |
| 869 | 67.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 915 | 67.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |