FiT-DB / Search/ Help/ Sample detail

Os06g0273100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Chitin-binding lectin 1 precursor (PL-I).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.13 (0.0316) R2 : 0.821
β1 : -3.26 (0.116) R2dD : 0.324 R2D : 0.179
β2 : 2.61 (0.0824) R2dC : 0.394 R2C : 0.369
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.37 (0.0674) R2dN8 : 0.217 R2N8 : 0.0908
σ : 0.594
deviance : 160.65
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
138.52 0.553 8.2 -3.03 2.61 1.54 -1.49 3.04 -1.23 17.8 19.4 6047 -- --
148.65 0.568 8.07 -2.54 2.54 1.03 -1.27 -- -1.06 17.7 20.1 6095 -- --
143.9 0.559 8.2 -3.02 2.61 1.55 -- 3.07 -1.23 17.8 19.39 6097 -- --
151.88 0.574 8.09 -2.71 2.57 0.761 -- -- -1.17 17.8 20.04 6101 -- --
491.68 1.03 8.17 -3.04 -- 1.8 -- 3.45 -1.27 -- 19.1 5668 -- --
155.09 0.584 8.12 -3.27 2.61 -- -1.5 -- -1.36 17.8 -- -- -- --
160.65 0.594 8.13 -3.26 2.61 -- -- -- -1.37 17.8 -- -- -- --
501.22 1.04 8.03 -2.73 -- 0.706 -- -- -1.16 -- 21.1 7001 -- --
176.95 0.62 7.9 -- 2.6 2.49 -- -- -0.335 17.8 19.4 47520 -- --
512.85 1.06 8.09 -3.34 -- -- -- -- -1.43 -- -- -- -- --
440.48 0.982 8.05 -- 2.66 -- -- -- -1.01 17.7 -- -- -- --
526.18 1.07 7.85 -- -- 2.57 -- -- -0.365 -- 19.39 47520 -- --
806.98 1.33 8 -- -- -- -- -- -1.06 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 131.49 wind 5.0 270 < th dose dependent rect. 2 4
5 132.59 wind 3.0 270 < th dose independent rect. 2 4
9 133.23 atmosphere 1010.0 30 < th dose independent rect. 4 4
10 133.26 precipitation 0.1 270 < th dose independent rect. 5 22
11 133.26 precipitation 0.1 270 < th dose dependent rect. 5 22
13 133.36 precipitation 0.1 270 < th dose independent rect. 6 20
15 133.36 precipitation 0.1 270 < th dose dependent rect. 6 20
19 133.63 humidity 60.0 270 > th dose dependent rect. 2 4
31 134.23 radiation 1.0 270 < th dose independent rect. 2 7
34 134.30 humidity 60.0 270 > th dose dependent rect. 3 2
35 134.32 radiation 10.0 270 < th dose independent rect. 2 4
40 134.36 temperature 30.0 270 < th dose dependent rect. 21 4
42 134.39 humidity 60.0 270 > th dose independent rect. 6 19
44 134.43 precipitation 0.1 30 < th dose independent rect. 8 20
45 134.43 precipitation 0.1 30 < th dose dependent rect. 8 20
46 134.44 radiation 10.0 270 < th dose dependent rect. 2 4
49 134.47 atmosphere 1010.0 270 < th dose independent rect. 2 4
51 134.47 radiation 1.0 270 < th dose dependent rect. 2 7
57 134.51 temperature 15.0 270 > th dose independent rect. 15 15
60 134.55 temperature 10.0 270 > th dose independent rect. 2 4
62 134.55 temperature 30.0 270 < th dose independent rect. 2 4
63 134.55 humidity 50.0 270 > th dose independent rect. 2 4
66 134.55 atmosphere 995.0 270 > th dose independent rect. 2 4
71 134.55 temperature 10.0 270 > th dose independent rect. 6 20
73 134.59 humidity 50.0 30 > th dose dependent rect. 4 4
82 134.68 wind 7.0 270 < th dose independent rect. 21 4
87 134.73 wind 1.0 270 > th dose independent rect. 5 21
89 134.75 humidity 90.0 270 > th dose dependent rect. 2 20
94 134.80 atmosphere 995.0 270 > th dose independent rect. 1 20
97 134.82 temperature 15.0 270 > th dose independent rect. 11 10
103 134.87 precipitation 0.1 270 < th dose independent rect. 2 4
106 134.87 precipitation 0.1 270 < th dose dependent rect. 2 4
112 134.93 radiation 1.0 270 < th dose dependent rect. 3 2
114 134.95 radiation 1.0 270 < th dose independent rect. 3 2
122 134.96 temperature 10.0 270 > th dose independent rect. 3 2
124 134.96 temperature 30.0 270 < th dose independent rect. 3 2
125 134.96 humidity 50.0 270 > th dose independent rect. 3 2
128 134.96 atmosphere 995.0 270 > th dose independent rect. 3 2
129 134.96 atmosphere 1010.0 270 < th dose independent rect. 3 2
134 134.96 temperature 10.0 270 > th dose independent rect. 5 22
138 134.99 wind 5.0 30 < th dose independent rect. 4 4
140 135.02 wind 9.0 270 < th dose independent rect. 6 20
158 135.04 temperature 15.0 270 > th dose independent rect. 1 20
169 135.14 radiation 40.0 30 < th dose independent rect. 4 4
183 135.25 temperature 10.0 30 > th dose independent rect. 4 4
185 135.25 temperature 30.0 30 < th dose independent rect. 4 4
186 135.25 humidity 50.0 30 > th dose independent rect. 4 4
188 135.25 atmosphere 995.0 30 > th dose independent rect. 4 4
190 135.25 temperature 10.0 30 > th dose independent rect. 8 20
199 135.31 temperature 30.0 90 < th dose dependent rect. 21 6
204 135.33 precipitation 0.1 30 < th dose independent rect. 4 4
205 135.33 precipitation 0.1 30 < th dose dependent rect. 4 4
206 135.34 wind 9.0 270 < th dose independent rect. 1 20
208 135.36 temperature 10.0 270 > th dose independent rect. 21 4
209 135.36 temperature 30.0 270 < th dose independent rect. 21 4
210 135.36 humidity 50.0 270 > th dose independent rect. 21 4
213 135.36 atmosphere 995.0 270 > th dose independent rect. 21 4
214 135.36 radiation 1.0 270 < th dose independent rect. 21 4
220 135.36 radiation 1.0 270 < th dose dependent rect. 21 4
230 135.39 humidity 80.0 270 > th dose dependent rect. 1 9
231 135.40 atmosphere 995.0 270 > th dose independent rect. 16 14
234 135.42 temperature 10.0 270 > th dose dependent rect. 2 4
245 135.43 precipitation 0.1 270 < th dose independent rect. 21 4
247 135.43 precipitation 0.1 270 < th dose dependent rect. 21 4
251 135.48 radiation 40.0 30 < th dose dependent rect. 4 4
253 135.49 temperature 10.0 30 > th dose dependent rect. 4 4
254 135.53 humidity 50.0 10 > th dose independent rect. 8 20
273 135.63 wind 9.0 4320 < th dose independent rect. 4 5
281 135.69 wind 1.0 270 > th dose independent rect. 5 10
284 135.72 wind 9.0 30 < th dose independent rect. 8 20
287 135.73 wind 1.0 270 > th dose independent rect. 6 19
288 135.74 atmosphere 1015.0 270 < th dose independent rect. 1 20
301 135.80 radiation 1.0 270 < th dose dependent rect. 2 18
328 135.85 wind 1.0 43200 < th dose dependent rect. 5 2
341 135.97 humidity 80.0 270 > th dose dependent rect. 1 12
354 136.03 atmosphere 1015.0 270 < th dose dependent rect. 3 2
358 136.05 precipitation 0.1 30 < th dose independent rect. 23 5
359 136.05 humidity 90.0 270 > th dose independent rect. 2 19
360 136.05 precipitation 0.1 30 < th dose dependent rect. 23 5
395 136.16 wind 9.0 270 < th dose dependent rect. 21 4
396 136.17 wind 7.0 270 < th dose independent rect. 20 6
398 136.17 atmosphere 995.0 270 > th dose independent rect. 2 18
403 136.18 humidity 50.0 10 > th dose independent rect. 8 18
407 136.22 temperature 30.0 30 < th dose independent rect. 8 20
409 136.23 temperature 10.0 270 > th dose dependent rect. 3 2
412 136.25 wind 7.0 270 < th dose independent rect. 23 1
417 136.29 radiation 1.0 270 < th dose independent rect. 2 17
418 136.29 wind 9.0 30 < th dose independent rect. 4 19
421 136.30 wind 7.0 30 < th dose independent rect. 23 5
430 136.32 atmosphere 995.0 30 > th dose independent rect. 8 20
431 136.33 temperature 10.0 30 > th dose dependent rect. 4 19
434 136.35 wind 1.0 30 > th dose independent rect. 8 20
441 136.40 temperature 10.0 270 > th dose independent rect. 23 1
442 136.40 temperature 30.0 270 < th dose independent rect. 23 1
443 136.40 humidity 50.0 270 > th dose independent rect. 23 1
446 136.40 atmosphere 995.0 270 > th dose independent rect. 23 1
447 136.40 radiation 1.0 270 < th dose independent rect. 23 1
453 136.40 temperature 10.0 270 > th dose independent rect. 24 23
456 136.40 radiation 1.0 270 < th dose dependent rect. 23 1
470 136.43 precipitation 0.1 270 < th dose independent rect. 21 14
472 136.43 precipitation 0.1 270 < th dose dependent rect. 21 14
473 136.44 precipitation 0.1 270 < th dose independent rect. 23 1
478 136.44 precipitation 0.1 270 < th dose dependent rect. 23 1
486 136.47 temperature 10.0 30 > th dose independent rect. 23 5
487 136.47 temperature 30.0 30 < th dose independent rect. 23 5
488 136.47 humidity 50.0 30 > th dose independent rect. 23 5
491 136.47 atmosphere 995.0 30 > th dose independent rect. 23 5
492 136.47 radiation 1.0 30 < th dose independent rect. 23 5
497 136.47 temperature 10.0 30 > th dose independent rect. 4 19
499 136.47 atmosphere 1015.0 30 < th dose independent rect. 4 19
501 136.47 radiation 1.0 30 < th dose dependent rect. 23 5
513 136.53 wind 1.0 43200 > th dose independent rect. 4 4
516 136.55 wind 9.0 270 < th dose independent rect. 21 14
525 136.57 humidity 80.0 90 > th dose dependent rect. 4 7
536 136.62 temperature 30.0 270 < th dose dependent rect. 23 1
538 136.62 temperature 10.0 10 > th dose dependent rect. 15 17
546 136.68 atmosphere 1015.0 10 < th dose dependent rect. 4 4
557 136.72 precipitation 0.1 270 < th dose independent rect. 6 9
558 136.72 precipitation 0.1 270 < th dose dependent rect. 6 9
564 136.76 wind 1.0 90 > th dose independent rect. 23 15
579 136.80 temperature 10.0 1440 > th dose independent rect. 4 5
582 136.80 humidity 50.0 1440 > th dose independent rect. 4 5
584 136.80 atmosphere 995.0 1440 > th dose independent rect. 4 5
585 136.80 atmosphere 1015.0 1440 < th dose independent rect. 4 5
587 136.80 temperature 10.0 1440 > th dose independent rect. 9 19
592 136.81 wind 9.0 270 < th dose independent rect. 11 10
593 136.81 wind 9.0 270 < th dose independent rect. 2 18
598 136.83 humidity 50.0 270 > th dose independent rect. 21 14
602 136.84 temperature 10.0 270 > th dose independent rect. 21 14
603 136.84 atmosphere 995.0 270 > th dose independent rect. 21 14
607 136.85 temperature 10.0 270 > th dose independent rect. 6 9
608 136.85 atmosphere 1015.0 270 < th dose independent rect. 6 9
629 136.87 precipitation 0.1 270 < th dose independent rect. 20 6
639 136.87 precipitation 0.1 270 < th dose dependent rect. 20 6
654 136.91 temperature 10.0 270 > th dose independent rect. 20 6
655 136.91 temperature 30.0 270 < th dose independent rect. 20 6
656 136.91 humidity 50.0 270 > th dose independent rect. 20 6
659 136.91 atmosphere 995.0 270 > th dose independent rect. 20 6
660 136.91 radiation 1.0 270 < th dose independent rect. 20 6
665 136.91 wind 1.0 43200 < th dose independent rect. 22 9
666 136.91 temperature 10.0 270 > th dose independent rect. 2 18
667 136.91 atmosphere 1015.0 270 < th dose independent rect. 2 18
668 136.91 radiation 1.0 270 < th dose dependent rect. 20 6
704 136.98 atmosphere 995.0 270 > th dose independent rect. 6 9
723 136.99 radiation 40.0 270 < th dose independent rect. 16 14
727 137.00 wind 1.0 43200 > th dose independent rect. 5 2
731 137.02 atmosphere 995.0 270 > th dose independent rect. 11 10
732 137.02 wind 9.0 270 < th dose independent rect. 15 15
735 137.02 atmosphere 1015.0 270 < th dose dependent rect. 2 4
752 137.05 radiation 1.0 270 > th dose independent rect. 6 9
753 137.06 atmosphere 1015.0 270 < th dose independent rect. 21 4
755 137.06 temperature 30.0 270 < th dose independent rect. 6 20
766 137.09 precipitation 0.1 10 < th dose independent rect. 4 19
767 137.09 precipitation 0.1 10 < th dose dependent rect. 4 19
829 137.22 temperature 10.0 270 > th dose dependent rect. 15 15
854 137.27 temperature 15.0 10 > th dose independent rect. 15 17
855 137.27 atmosphere 1015.0 270 < th dose independent rect. 6 19
858 137.28 wind 9.0 270 < th dose dependent rect. 1 19
863 137.31 wind 1.0 270 > th dose independent rect. 23 1
877 137.34 wind 9.0 270 < th dose independent rect. 6 9
885 137.36 humidity 90.0 270 > th dose independent rect. 2 8
900 137.39 humidity 50.0 270 > th dose dependent rect. 21 4
909 137.41 wind 9.0 270 < th dose dependent rect. 23 1
944 137.43 atmosphere 1015.0 30 < th dose independent rect. 8 20
964 137.48 atmosphere 995.0 30 > th dose independent rect. 4 19
971 137.50 atmosphere 1015.0 270 < th dose independent rect. 11 10
973 137.50 precipitation 0.1 270 < th dose independent rect. 1 20
975 137.50 precipitation 0.1 270 < th dose dependent rect. 1 20
989 137.54 wind 1.0 43200 > th dose independent rect. 22 9
990 137.55 wind 1.0 14400 < th dose independent rect. 2 7
1000 137.57 wind 1.0 270 > th dose independent rect. 21 14