Os06g0271900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0271900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.56 | 0.403 | 7.16 | 1.54 | 0.276 | 2.23 | -0.406 | 0.579 | 0.035 | 17.7 | 15.94 | 99 | -- | -- |
| 73.77 | 0.4 | 7.17 | 1.46 | 0.249 | 2.19 | -0.259 | -- | 0.0196 | 17.2 | 16.56 | 121 | -- | -- |
| 73.81 | 0.4 | 7.16 | 1.54 | 0.273 | 2.13 | -- | 0.402 | 0.0364 | 16.9 | 16.44 | 120 | -- | -- |
| 73.83 | 0.4 | 7.17 | 1.47 | 0.265 | 2.14 | -- | -- | 0.0188 | 16.8 | 16.6 | 123 | -- | -- |
| 76.39 | 0.407 | 7.17 | 1.46 | -- | 2.36 | -- | 0.282 | -0.00651 | -- | 16.55 | 133 | -- | -- |
| 128.55 | 0.532 | 7.1 | 1.93 | 0.935 | -- | 0.455 | -- | 0.345 | 15.8 | -- | -- | -- | -- |
| 129.16 | 0.532 | 7.1 | 1.94 | 0.938 | -- | -- | -- | 0.347 | 15.8 | -- | -- | -- | -- |
| 76.4 | 0.407 | 7.17 | 1.41 | -- | 2.34 | -- | -- | -0.0217 | -- | 17 | 133 | -- | -- |
| 124.11 | 0.519 | 7.22 | -- | 0.0738 | 3.08 | -- | -- | -0.224 | 19.7 | 13.25 | 137 | -- | -- |
| 177.64 | 0.623 | 7.1 | 1.9 | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
| 228.39 | 0.707 | 7.15 | -- | 0.9 | -- | -- | -- | 0.131 | 15.8 | -- | -- | -- | -- |
| 124.36 | 0.519 | 7.22 | -- | -- | 3.1 | -- | -- | -0.227 | -- | 12.64 | 143 | -- | -- |
| 273.03 | 0.771 | 7.14 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 6 | 72.03 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 8 | 72.43 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 11 | 72.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 22 |
| 20 | 73.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 27 | 73.70 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 34 | 73.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 37 | 74.01 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 45 | 74.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 47 | 74.37 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 62 | 74.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 21 |
| 63 | 74.77 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 69 | 75.03 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 73 | 75.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 91 | 75.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 94 | 75.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 108 | 76.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 116 | 76.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 155 | 77.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 192 | 78.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 194 | 78.09 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 218 | 78.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 234 | 78.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 280 | 79.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 282 | 79.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 339 | 80.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 400 | 80.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 6 |
| 407 | 80.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 428 | 81.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 626 | 82.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 12 |
| 692 | 82.41 | temperature | 25 | 1440 | < th | dose dependent | sin | 6 | NA |
| 930 | 83.05 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |