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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0271000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.37 (0.0733) R2 : 0.575
β1 : -1.43 (0.429) R2dD : 0.0558 R2D : -0.321
β2 : 1.74 (0.134) R2dC : 0.155 R2C : 0.0442
β3 : 3.28 (0.194) R2dE : 0.407 R2E : 0.189
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -9.16 (1.27) R2dD*E : 0.243 R2D*E : 0.00856
γ1 : -1.32 (0.159) R2dN8 : 0.182 R2N8 : -0.0848
σ : 0.981
deviance : 443.89
__
_____
C
peak time of C : 7.74
E
wheather : temperature
threshold : 27
memory length : 5807
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
443.22 0.989 5.37 -1.5 1.74 3.32 0.698 -9.34 -1.36 7.74 26.8 5827 -- --
473.39 1.01 5.23 -1.09 1.73 3.77 0.456 -- -1.6 7.83 21.29 17568 -- --
443.89 0.981 5.37 -1.43 1.74 3.28 -- -9.16 -1.32 7.74 27 5807 -- --
474.1 1.01 5.24 -1.18 1.78 3.86 -- -- -1.63 7.85 21.3 17847 -- --
604.06 1.14 5.41 -1.47 -- 3.28 -- -9.23 -1.32 -- 27.1 5769 -- --
728.61 1.27 4.89 2.32 1.72 -- 0.64 -- -0.0604 7.65 -- -- -- --
729.76 1.27 4.89 2.34 1.72 -- -- -- -0.061 7.69 -- -- -- --
639.32 1.18 5.28 -1.21 -- 3.86 -- -- -1.59 -- 21.05 17554 -- --
505.76 1.05 5.21 -- 1.86 3.65 -- -- -1.46 7.32 21.4 17855 -- --
889.63 1.39 4.93 2.36 -- -- -- -- -0.0358 -- -- -- -- --
873.67 1.38 4.95 -- 1.74 -- -- -- -0.321 7.59 -- -- -- --
653.91 1.19 5.23 -- -- 3.15 -- -- -1.24 -- 21.2 17456 -- --
1036.49 1.5 4.99 -- -- -- -- -- -0.298 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 373.62 wind 1 43200 < th dose dependent rect. 21 7
4 382.54 radiation 10 43200 < th dose independent rect. 5 3
7 383.18 radiation 10 43200 < th dose independent rect. 1 7
8 383.19 radiation 10 43200 < th dose independent rect. 22 10
54 394.82 radiation 40 43200 > th dose dependent rect. 10 1
56 395.14 wind 1 43200 < th dose dependent rect. 16 13
71 396.88 radiation 1 43200 > th dose dependent rect. 4 3
83 397.84 radiation 10 43200 < th dose independent sin 10 NA
125 403.40 humidity 80 43200 < th dose dependent rect. 21 12
126 403.63 radiation 40 43200 < th dose independent rect. 14 21
127 404.37 wind 1 43200 < th dose independent rect. 19 9
130 405.00 radiation 40 43200 > th dose dependent rect. 15 21
131 405.13 radiation 40 43200 > th dose dependent rect. 7 5
154 406.01 radiation 40 43200 < th dose independent rect. 10 1
187 407.65 radiation 40 43200 < th dose independent rect. 4 7
188 407.66 radiation 40 43200 < th dose independent rect. 1 10
192 407.68 radiation 40 43200 < th dose independent rect. 22 13
194 407.68 radiation 40 43200 < th dose independent rect. 19 16
200 407.70 radiation 40 43200 < th dose independent rect. 7 4
203 408.34 radiation 40 43200 < th dose independent sin 10 NA
239 410.36 radiation 40 43200 < th dose dependent rect. 4 3
240 410.38 radiation 40 43200 < th dose dependent rect. 1 6
245 410.51 radiation 40 43200 < th dose dependent rect. 19 12
247 410.53 radiation 30 43200 < th dose dependent rect. 22 9
262 410.93 wind 1 43200 < th dose independent rect. 21 7
265 411.14 radiation 40 43200 > th dose dependent sin 10 NA
278 411.53 radiation 40 43200 < th dose independent rect. 14 2
281 411.71 radiation 40 43200 < th dose independent rect. 14 18
293 412.05 radiation 40 43200 < th dose independent rect. 14 16
294 412.07 radiation 40 43200 < th dose independent rect. 14 6
295 412.07 radiation 40 43200 < th dose independent rect. 14 9
300 412.09 radiation 40 43200 < th dose independent rect. 14 12
301 412.10 radiation 40 43200 < th dose independent rect. 14 4
308 412.37 temperature 30 43200 > th dose independent rect. 14 3
311 412.56 wind 1 43200 < th dose dependent rect. 24 3
313 412.79 temperature 30 43200 > th dose independent rect. 14 1
330 413.46 temperature 30 43200 < th dose independent rect. 14 3
332 413.55 wind 1 43200 < th dose dependent sin 14 NA
349 414.49 humidity 80 43200 > th dose independent rect. 2 1
432 418.52 wind 3 43200 > th dose independent rect. 9 1
436 418.72 temperature 25 43200 > th dose independent rect. 23 1
445 419.12 temperature 25 43200 < th dose independent rect. 23 1
451 419.54 temperature 30 43200 < th dose independent rect. 12 18
454 419.55 temperature 30 43200 < th dose independent rect. 12 16
457 419.56 temperature 30 43200 < th dose independent rect. 12 12
528 419.99 temperature 30 43200 < th dose independent rect. 2 15
529 419.99 temperature 30 43200 < th dose independent rect. 23 18
534 420.00 temperature 30 43200 < th dose independent rect. 4 13
605 420.30 wind 1 43200 < th dose dependent rect. 11 19
769 421.78 wind 3 43200 < th dose independent rect. 9 1
771 421.86 temperature 30 43200 > th dose dependent rect. 14 1
776 421.99 wind 3 43200 < th dose independent rect. 21 1
788 422.26 temperature 30 43200 < th dose independent sin 19 NA
819 422.61 temperature 30 43200 > th dose independent sin 20 NA
844 422.93 radiation 20 43200 < th dose independent rect. 15 2
862 422.99 radiation 20 43200 < th dose independent rect. 15 5
863 422.99 radiation 20 43200 < th dose independent rect. 15 8
869 423.01 radiation 20 43200 < th dose independent rect. 15 11
948 423.43 radiation 40 43200 > th dose independent rect. 10 1