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Os06g0270200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Potassium transporter 8 (AtPOT8) (AtHAK8).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.4 (0.0402) R2 : 0.292
β1 : -0.397 (0.17) R2dD : 0.0128 R2D : -0.0275
β2 : 1.12 (0.0989) R2dC : 0.206 R2C : 0.208
β3 : 0.319 (0.194) R2dE : 0.00462 R2E : -0.0114
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 4.3 (0.592) R2dD*E : 0.13 R2D*E : 0.059
γ1 : 0.0266 (0.0894) R2dN8 : 0.000395 R2N8 : 0.00175
σ : 0.712
deviance : 233.49
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_____
C
peak time of C : 7.19
E
wheather : temperature
threshold : 24.5
memory length : 211
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
230.93 0.714 7.41 -0.45 1.13 0.193 -1.13 4.31 -0.00296 7.08 25.1 268 -- --
256.28 0.751 7.33 0.237 1.14 -0.137 -0.447 -- 0.145 7.07 25.1 268 -- --
233.49 0.712 7.4 -0.397 1.12 0.319 -- 4.3 0.0266 7.19 24.5 211 -- --
251.07 0.738 7.34 0.0822 1.13 -1.18 -- -- 0.117 7.03 18.01 1261 -- --
290.25 0.793 7.42 -0.332 -- 0.915 -- 5.01 0.121 -- 32.66 374 -- --
256.56 0.751 7.32 0.27 1.14 -- -0.463 -- 0.172 7.16 -- -- -- --
257.12 0.751 7.32 0.26 1.14 -- -- -- 0.173 7.14 -- -- -- --
307.67 0.817 7.32 0.48 -- 0.966 -- -- 0.317 -- 34.8 500 -- --
250.22 0.737 7.35 -- 1.13 -0.985 -- -- 0.0851 7.21 18 2359 -- --
325.49 0.843 7.35 0.282 -- -- -- -- 0.193 -- -- -- -- --
258.91 0.753 7.33 -- 1.14 -- -- -- 0.144 7.12 -- -- -- --
314.05 0.825 7.33 -- -- 0.903 -- -- 0.269 -- 48.36 498 -- --
327.58 0.845 7.36 -- -- -- -- -- 0.162 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 226.49 temperature 20 720 > th dose dependent rect. 18 18
4 227.62 temperature 20 270 > th dose dependent rect. 15 21
8 228.15 temperature 10 720 > th dose dependent rect. 17 19
9 228.31 temperature 20 90 > th dose dependent sin 8 NA
15 228.77 temperature 25 270 < th dose dependent rect. 20 21
22 228.95 temperature 25 10 < th dose independent rect. 22 18
50 229.80 atmosphere 1010 90 < th dose dependent rect. 11 11
59 230.01 temperature 25 270 < th dose dependent rect. 1 23
71 230.29 temperature 20 720 > th dose dependent sin 9 NA
78 230.58 wind 7 4320 > th dose dependent rect. 8 1
96 230.87 temperature 25 10 < th dose independent rect. 23 15
101 230.94 temperature 25 720 > th dose independent rect. 18 17
102 230.94 temperature 25 270 < th dose dependent no NA NA
110 231.03 temperature 25 720 < th dose independent rect. 18 16
112 231.04 atmosphere 1015 720 < th dose dependent rect. 10 2
122 231.10 temperature 25 270 < th dose dependent rect. 5 23
128 231.22 temperature 10 10 > th dose dependent rect. 17 23
131 231.27 temperature 10 10 > th dose dependent rect. 11 23
139 231.38 temperature 25 270 < th dose dependent rect. 15 23
145 231.44 temperature 20 1440 > th dose dependent rect. 20 1
153 231.52 temperature 25 270 < th dose dependent rect. 11 23
155 231.53 wind 7 4320 > th dose independent rect. 8 2
162 231.57 temperature 20 270 > th dose dependent rect. 11 22
171 231.68 temperature 25 270 < th dose dependent rect. 13 23
210 232.03 temperature 20 1440 > th dose dependent rect. 4 1
215 232.10 temperature 25 270 < th dose dependent sin 7 NA
217 232.11 temperature 25 10 < th dose independent rect. 19 22
229 232.17 wind 7 4320 < th dose independent rect. 8 2
254 232.36 temperature 25 10 < th dose independent rect. 23 13
272 232.42 temperature 20 1440 > th dose dependent rect. 18 12
278 232.46 atmosphere 1005 720 < th dose independent rect. 10 2
290 232.51 temperature 20 30 > th dose dependent rect. 17 19
291 232.52 temperature 10 720 > th dose dependent sin 10 NA
319 232.63 temperature 30 10 < th dose dependent rect. 5 23
346 232.74 wind 7 1440 > th dose independent rect. 24 10
361 232.78 temperature 30 10 < th dose dependent rect. 22 19
370 232.81 temperature 25 270 < th dose dependent rect. 8 23
379 232.84 wind 7 1440 > th dose independent rect. 4 5
382 232.85 atmosphere 1005 30 < th dose independent rect. 11 9
385 232.86 wind 7 1440 > th dose dependent rect. 4 5
388 232.87 temperature 20 1440 > th dose dependent rect. 18 8
448 233.05 temperature 30 10 < th dose dependent rect. 7 23
469 233.11 temperature 25 30 < th dose dependent rect. 5 20
474 233.13 temperature 15 270 > th dose dependent no NA NA
515 233.28 atmosphere 1010 270 < th dose dependent sin 21 NA
526 233.30 temperature 15 10 > th dose dependent rect. 13 23
566 233.45 temperature 15 270 > th dose dependent rect. 23 12
577 233.48 temperature 15 270 > th dose dependent rect. 21 23
580 233.51 temperature 25 10 > th dose independent sin 8 NA
621 233.62 temperature 25 30 < th dose dependent rect. 9 23
633 233.65 temperature 15 270 > th dose dependent rect. 23 23
636 233.66 temperature 25 720 > th dose independent sin 9 NA
654 233.68 temperature 25 30 < th dose dependent rect. 13 23
657 233.69 temperature 15 10 > th dose dependent rect. 15 23
658 233.69 temperature 25 30 < th dose dependent rect. 15 23
663 233.71 temperature 25 30 < th dose dependent rect. 17 23
697 233.83 temperature 25 30 < th dose dependent rect. 11 23
702 233.84 temperature 20 270 > th dose dependent rect. 2 23
717 233.90 temperature 20 30 < th dose independent rect. 23 21
734 233.95 temperature 25 720 < th dose independent sin 11 NA
751 234.00 temperature 30 720 < th dose dependent sin 12 NA
766 234.03 temperature 20 30 < th dose independent rect. 4 21
797 234.13 temperature 30 720 < th dose dependent rect. 18 13
805 234.15 temperature 30 720 < th dose dependent rect. 19 11
854 234.29 temperature 25 30 < th dose dependent rect. 8 16
872 234.33 temperature 20 270 < th dose independent rect. 3 21
878 234.34 temperature 20 10 > th dose dependent rect. 15 21
898 234.41 temperature 15 10 > th dose dependent no NA NA
909 234.44 temperature 20 10 > th dose dependent rect. 4 23
917 234.46 wind 7 1440 < th dose independent rect. 23 11
948 234.53 atmosphere 995 30 > th dose dependent rect. 7 23
966 234.57 wind 7 1440 < th dose independent rect. 2 7
988 234.63 temperature 15 10 > th dose dependent rect. 24 23