Os06g0265100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0265100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.59 | 0.673 | 2.81 | 0.0379 | 0.115 | -5.41 | -0.0495 | 20.4 | 0.22 | 20.4 | 0.1 | 30 | -- | -- |
| 214.79 | 0.688 | 2.86 | -0.0484 | 0.149 | -0.27 | 0.106 | -- | 0.228 | 20.4 | 0.1 | 30 | -- | -- |
| 208.6 | 0.673 | 2.81 | 0.0396 | 0.116 | -5.41 | -- | 20.4 | 0.22 | 20.5 | 0.09886 | 30 | -- | -- |
| 213.49 | 0.681 | 2.86 | -0.0816 | 0.14 | 0.765 | -- | -- | 0.235 | 20.3 | 0.09411 | 18 | -- | -- |
| 209.25 | 0.674 | 2.8 | 0.056 | -- | -6.16 | -- | 23.2 | 0.218 | -- | 0.002262 | 34 | -- | -- |
| 214.88 | 0.687 | 2.86 | -0.0532 | 0.149 | -- | 0.0971 | -- | 0.229 | 20.3 | -- | -- | -- | -- |
| 214.9 | 0.686 | 2.86 | -0.0558 | 0.149 | -- | -- | -- | 0.229 | 20.1 | -- | -- | -- | -- |
| 214.5 | 0.682 | 2.86 | -0.0831 | -- | 0.827 | -- | -- | 0.235 | -- | 0.05229 | 18 | -- | -- |
| 213.66 | 0.681 | 2.86 | -- | 0.139 | 0.746 | -- | -- | 0.244 | 19.8 | 0.4603 | 18 | -- | -- |
| 216.13 | 0.687 | 2.86 | -0.0571 | -- | -- | -- | -- | 0.227 | -- | -- | -- | -- | -- |
| 214.99 | 0.686 | 2.86 | -- | 0.15 | -- | -- | -- | 0.235 | 20.1 | -- | -- | -- | -- |
| 214.7 | 0.682 | 2.86 | -- | -- | 0.792 | -- | -- | 0.243 | -- | 0.4059 | 18 | -- | -- |
| 216.21 | 0.686 | 2.86 | -- | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 196.30 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 196.32 | wind | 7.0 | 30 | > th | dose independent | rect. | 18 | 4 |
| 7 | 196.36 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 11 | 196.46 | wind | 7.0 | 90 | > th | dose dependent | rect. | 19 | 3 |
| 17 | 196.57 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 24 | 196.66 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 25 | 196.68 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 35 | 196.81 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 39 | 196.85 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 41 | 196.86 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 43 | 196.86 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 44 | 196.86 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 48 | 196.86 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 50 | 196.86 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 55 | 196.86 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 56 | 196.86 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 57 | 196.86 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 62 | 196.86 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 66 | 196.88 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 72 | 196.96 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 74 | 196.98 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 79 | 197.09 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 80 | 197.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 83 | 197.09 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 87 | 197.09 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 96 | 197.09 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 97 | 197.09 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 117 | 197.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 120 | 197.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 138 | 197.30 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 140 | 197.55 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 147 | 197.69 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 175 | 197.98 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 191 | 198.45 | wind | 7.0 | 90 | > th | dose independent | rect. | 21 | 1 |
| 193 | 198.47 | wind | 7.0 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 215 | 198.49 | wind | 7.0 | 30 | > th | dose dependent | rect. | 21 | 11 |
| 251 | 198.52 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 21 | 1 |
| 264 | 198.52 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 21 | 1 |
| 285 | 198.95 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 21 | 1 |
| 296 | 198.95 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 309 | 199.44 | wind | 7.0 | 30 | > th | dose dependent | sin | 11 | NA |
| 314 | 199.87 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 339 | 200.20 | wind | 7.0 | 30 | < th | dose independent | sin | 11 | NA |
| 340 | 200.27 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 371 | 200.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 372 | 200.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 373 | 200.52 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 376 | 200.60 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 2 |
| 377 | 200.61 | wind | 7.0 | 30 | > th | dose independent | sin | 11 | NA |
| 396 | 201.15 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 403 | 201.15 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 415 | 201.32 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 445 | 201.88 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 477 | 202.20 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 22 | 1 |
| 480 | 202.31 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 483 | 202.43 | wind | 7.0 | 30 | > th | dose dependent | rect. | 16 | 6 |
| 524 | 203.27 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 548 | 203.48 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 3 |
| 563 | 203.93 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 608 | 204.28 | wind | 7.0 | 30 | > th | dose independent | rect. | 16 | 6 |
| 612 | 204.28 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 16 | 1 |
| 658 | 204.47 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 16 | 1 |
| 686 | 204.61 | precipitation | 0.1 | 90 | > th | dose independent | sin | 15 | NA |
| 689 | 204.62 | precipitation | 0.1 | 90 | < th | dose independent | sin | 15 | NA |
| 690 | 204.62 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 15 | NA |
| 742 | 204.82 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 746 | 204.84 | humidity | 90.0 | 10 | > th | dose independent | rect. | 22 | 1 |
| 763 | 204.94 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 13 |
| 858 | 205.10 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 880 | 205.19 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 2 |
| 882 | 205.20 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 11 |
| 910 | 205.40 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 955 | 205.56 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 974 | 205.63 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 16 | NA |
| 988 | 205.66 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 991 | 205.69 | wind | 5.0 | 30 | < th | dose independent | rect. | 18 | 6 |
| 997 | 205.74 | radiation | 20.0 | 90 | > th | dose independent | rect. | 15 | 2 |