Os06g0263400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Very-long-chain 3-ketoacyl-CoA synthase family protein.
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Os06g0263400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Very-long-chain 3-ketoacyl-CoA synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.7 | 0.723 | 6.28 | 4.21 | 0.199 | -1.26 | 1.61 | -0.89 | 0.542 | 0.913 | 20.5 | 512 | -- | -- |
| 238.91 | 0.72 | 6.25 | 4.38 | 0.188 | -1.17 | 1.65 | -- | 0.578 | 1.57 | 20.5 | 510 | -- | -- |
| 246.84 | 0.732 | 6.29 | 4.13 | 0.197 | -1.24 | -- | -0.896 | 0.522 | 23.4 | 20.7 | 460 | -- | -- |
| 248.87 | 0.735 | 6.28 | 4.3 | 0.215 | -1.18 | -- | -- | 0.553 | 22.8 | 20.62 | 512 | -- | -- |
| 248.16 | 0.734 | 6.28 | 4.11 | -- | -1.21 | -- | -0.931 | 0.529 | -- | 20.62 | 393 | -- | -- |
| 282.03 | 0.787 | 6.31 | 3.97 | 0.179 | -- | 1.8 | -- | 0.327 | 2.47 | -- | -- | -- | -- |
| 293.75 | 0.803 | 6.31 | 3.92 | 0.184 | -- | -- | -- | 0.316 | 2.59 | -- | -- | -- | -- |
| 251.07 | 0.738 | 6.26 | 4.31 | -- | -1.14 | -- | -- | 0.567 | -- | 20.7 | 416 | -- | -- |
| 561.23 | 1.1 | 6.4 | -- | 0.337 | 2.32 | -- | -- | -1.78 | 23.7 | 22.09 | 27562 | -- | -- |
| 295.73 | 0.804 | 6.31 | 3.93 | -- | -- | -- | -- | 0.32 | -- | -- | -- | -- | -- |
| 699.22 | 1.24 | 6.41 | -- | 0.261 | -- | -- | -- | -0.121 | 2.79 | -- | -- | -- | -- |
| 398.16 | 0.929 | 6.58 | -- | -- | 2.68 | -- | -- | -0.837 | -- | 19.3 | 47520 | -- | -- |
| 703.16 | 1.24 | 6.41 | -- | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.39 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 2 | 217.89 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 4 | 218.25 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 5 | 218.38 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 6 | 218.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 7 | 218.48 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 39 | 221.63 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 40 | 221.63 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 49 | 222.35 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 55 | 222.78 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 76 | 224.46 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 77 | 224.49 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 82 | 225.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 108 | 226.44 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 129 | 227.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 130 | 227.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 138 | 228.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 146 | 228.89 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 161 | 230.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 162 | 230.19 | wind | 9.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 169 | 230.83 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 185 | 231.63 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 11 |
| 188 | 231.66 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 206 | 232.27 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 207 | 232.28 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 233 | 232.81 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 14 |
| 237 | 232.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 11 |
| 241 | 232.93 | wind | 9.0 | 14400 | > th | dose independent | rect. | 21 | 20 |
| 257 | 233.44 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 270 | 233.68 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 303 | 234.21 | wind | 3.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 336 | 234.66 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 356 | 235.06 | wind | 3.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 363 | 235.24 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 370 | 235.29 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 378 | 235.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 389 | 235.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 397 | 235.66 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 417 | 235.81 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 420 | 235.86 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 483 | 236.66 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 484 | 236.67 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 485 | 236.67 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 21 | 20 |
| 495 | 236.80 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 516 | 237.08 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 552 | 237.62 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 576 | 237.96 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 584 | 238.04 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 599 | 238.14 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 619 | 238.34 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 625 | 238.41 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 656 | 238.72 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 666 | 238.79 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 15 |
| 667 | 238.80 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 682 | 238.93 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 743 | 239.55 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 785 | 239.98 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 793 | 240.01 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 797 | 240.03 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 812 | 240.10 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 12 |
| 827 | 240.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 872 | 240.52 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 892 | 240.73 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 934 | 241.06 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 22 |