Os06g0262200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Very-long-chain fatty acid condensing enzyme CUT1.
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Os06g0262200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Very-long-chain fatty acid condensing enzyme CUT1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.42 | 0.528 | 2.93 | -0.336 | 0.177 | -1.6 | -0.763 | 0.659 | 0.0404 | 6.81 | 9 | 9 | -- | -- |
| 126.51 | 0.524 | 2.93 | -0.336 | 0.177 | -1.78 | -0.746 | -- | 0.0391 | 6.7 | 9 | 8 | -- | -- |
| 127.89 | 0.527 | 2.93 | -0.336 | 0.177 | -1.53 | -- | 0.661 | 0.0404 | 6.81 | 9 | 9 | -- | -- |
| 127.95 | 0.527 | 2.93 | -0.354 | 0.172 | -1.69 | -- | -- | 0.0395 | 7.23 | 8.988 | 8 | -- | -- |
| 129.43 | 0.53 | 2.93 | -0.355 | -- | -1.48 | -- | 0.626 | 0.0451 | -- | 8.992 | 8 | -- | -- |
| 137.66 | 0.55 | 2.94 | -0.468 | 0.153 | -- | -0.485 | -- | -0.00969 | 8.84 | -- | -- | -- | -- |
| 138.45 | 0.551 | 2.94 | -0.484 | 0.153 | -- | -- | -- | -0.00972 | 9 | -- | -- | -- | -- |
| 129.51 | 0.53 | 2.93 | -0.354 | -- | -1.65 | -- | -- | 0.0411 | -- | 8.97 | 8 | -- | -- |
| 131.12 | 0.533 | 2.92 | -- | 0.174 | -1.88 | -- | -- | 0.0819 | 7.15 | 9 | 8 | -- | -- |
| 139.8 | 0.552 | 2.95 | -0.484 | -- | -- | -- | -- | -0.00876 | -- | -- | -- | -- | -- |
| 144.62 | 0.563 | 2.93 | -- | 0.153 | -- | -- | -- | 0.0442 | 9.24 | -- | -- | -- | -- |
| 132.68 | 0.536 | 2.93 | -- | -- | -1.84 | -- | -- | 0.0844 | -- | 8.993 | 8 | -- | -- |
| 145.99 | 0.564 | 2.93 | -- | -- | -- | -- | -- | 0.045 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.65 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 2 | 121.22 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 14 | 121.22 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 36 | 121.88 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 54 | 123.08 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 58 | 123.82 | wind | 9.0 | 270 | > th | dose independent | rect. | 10 | 4 |
| 59 | 123.84 | wind | 9.0 | 270 | > th | dose dependent | rect. | 10 | 4 |
| 76 | 124.00 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 106 | 124.67 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 147 | 124.98 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 148 | 124.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 151 | 124.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 155 | 124.98 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 164 | 124.98 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 165 | 124.98 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 185 | 124.98 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 188 | 124.98 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 208 | 125.08 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 210 | 125.10 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 211 | 125.11 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 213 | 125.13 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 215 | 125.15 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 216 | 125.16 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 233 | 125.22 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 250 | 125.28 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 256 | 125.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 258 | 125.29 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 259 | 125.29 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 262 | 125.29 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 264 | 125.29 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 266 | 125.29 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 271 | 125.29 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 272 | 125.29 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 274 | 125.29 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 279 | 125.29 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 287 | 125.38 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 296 | 125.46 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 310 | 125.58 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 327 | 125.74 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 330 | 125.74 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 336 | 125.80 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 343 | 125.94 | wind | 9.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 351 | 126.01 | wind | 9.0 | 270 | > th | dose independent | sin | 6 | NA |
| 403 | 126.26 | wind | 9.0 | 270 | < th | dose independent | sin | 6 | NA |
| 443 | 126.71 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 445 | 126.73 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 469 | 126.95 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 528 | 127.41 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 529 | 127.43 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 555 | 127.56 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 588 | 127.73 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 603 | 127.78 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 2 | 12 |
| 625 | 127.86 | wind | 9.0 | 10 | < th | dose independent | sin | 1 | NA |
| 633 | 127.88 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 635 | 127.89 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 2 | 8 |
| 637 | 127.91 | temperature | 20.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 656 | 127.94 | temperature | 20.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 680 | 127.98 | temperature | 30.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 735 | 128.07 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 6 |
| 749 | 128.09 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 755 | 128.10 | temperature | 30.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 759 | 128.11 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 760 | 128.11 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 789 | 128.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 790 | 128.15 | temperature | 10.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 855 | 128.26 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 926 | 128.38 | temperature | 25.0 | 10 | > th | dose dependent | no | NA | NA |
| 955 | 128.40 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 6 | 23 |