Os06g0261300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0261300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.34 | 0.721 | 5.42 | 1.07 | 1.07 | -1.04 | -0.756 | -0.0374 | 1.8 | 22.5 | 24.26 | 1646 | -- | -- |
| 235.24 | 0.714 | 5.43 | 1.06 | 1.06 | -1.08 | -0.762 | -- | 1.77 | 22.6 | 24.33 | 1654 | -- | -- |
| 237.58 | 0.718 | 5.43 | 1.07 | 1.07 | -1.08 | -- | 0.0571 | 1.77 | 22.5 | 24.39 | 1654 | -- | -- |
| 237.58 | 0.718 | 5.43 | 1.09 | 1.07 | -1.08 | -- | -- | 1.78 | 22.5 | 24.32 | 1654 | -- | -- |
| 286.79 | 0.789 | 5.4 | 0.996 | -- | -1.49 | -- | 0.101 | 1.79 | -- | 25 | 2187 | -- | -- |
| 274.83 | 0.777 | 5.33 | 1.47 | 1.09 | -- | -0.783 | -- | 2.19 | 22.5 | -- | -- | -- | -- |
| 277.3 | 0.78 | 5.33 | 1.5 | 1.1 | -- | -- | -- | 2.2 | 22.4 | -- | -- | -- | -- |
| 272.21 | 0.768 | 5.42 | 1.16 | -- | -1.35 | -- | -- | 1.72 | -- | 25.6 | 821 | -- | -- |
| 258.84 | 0.749 | 5.42 | -- | 1.05 | -1.37 | -- | -- | 1.71 | 22.4 | 21.6 | 4637 | -- | -- |
| 350.65 | 0.875 | 5.3 | 1.52 | -- | -- | -- | -- | 2.2 | -- | -- | -- | -- | -- |
| 336.84 | 0.859 | 5.37 | -- | 1.1 | -- | -- | -- | 2.03 | 22.5 | -- | -- | -- | -- |
| 302.88 | 0.811 | 5.45 | -- | -- | -1.58 | -- | -- | 1.54 | -- | 25.7 | 826 | -- | -- |
| 411.67 | 0.947 | 5.34 | -- | -- | -- | -- | -- | 2.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 235.19 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 3 | 235.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 6 | 235.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 21 |
| 7 | 236.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 8 | 236.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 14 | 236.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 18 | 236.23 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 31 | 236.31 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 60 | 236.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 78 | 236.62 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 94 | 236.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 114 | 236.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 5 |
| 117 | 236.93 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 130 | 237.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 145 | 237.10 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 148 | 237.12 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 10 |
| 170 | 237.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 12 | 11 |
| 187 | 237.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 203 | 237.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 22 |
| 248 | 237.48 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 258 | 237.49 | temperature | 20 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 267 | 237.52 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 320 | 237.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 329 | 237.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 357 | 237.77 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 374 | 237.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 385 | 237.85 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 393 | 237.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 399 | 237.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 400 | 237.88 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 463 | 237.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 22 |
| 552 | 238.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 570 | 238.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 600 | 238.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 636 | 238.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 5 |
| 789 | 238.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 801 | 238.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 819 | 238.63 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 875 | 238.71 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 915 | 238.77 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 924 | 238.77 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 999 | 238.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 3 |