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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0257600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.03 (0.0484) R2 : 0.0943
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.48 (0.824) R2dE : 0.0878 R2E : 0.0877
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.164 (0.102) R2dN8 : 0.00662 R2N8 : 0.00656
σ : 0.909
deviance : 380.82
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_____
C
peak time of C : --
E
wheather : humidity
threshold : 82.26
memory length : 67
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 2.6
open length of G : 1.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
377.26 0.913 3.04 0.177 0.0815 13.1 0.7 -32.9 -0.137 21.5 80 90 2.4 2
384.6 0.92 3.03 0.206 0.0386 5.49 0.868 -- -0.151 20.1 76.44 23 2.65 4.65
379.09 0.907 3.04 0.177 0.0794 13.1 -- -32.9 -0.136 21.5 80 90 2.4 2
379.53 0.907 3.02 0.233 0.112 5.27 -- -- -0.129 1.54 82.07 76 2.57 1.18
379.43 0.907 3.04 0.152 -- 13.2 -- -33 -0.138 -- 79.72 90 2.42 2.04
414.1 0.954 3.03 0.243 0.129 -- 0.541 -- -0.161 23.4 -- -- -- --
414.8 0.954 3.03 0.218 0.162 -- -- -- -0.165 2.07 -- -- -- --
379.43 0.907 3.02 0.231 -- 5.44 -- -- -0.138 -- 82.44 70 2.55 1.61
380.08 0.908 3.03 -- 0.108 5.45 -- -- -0.163 1.08 82 79 2.9 1.1
416.37 0.953 3.03 0.224 -- -- -- -- -0.162 -- -- -- -- --
416.04 0.954 3.04 -- 0.166 -- -- -- -0.19 2.1 -- -- -- --
380.82 0.909 3.03 -- -- 5.48 -- -- -0.164 -- 82.26 67 2.6 1.9
417.69 0.954 3.03 -- -- -- -- -- -0.186 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 377.31 humidity 80 90 < th dose independent rect. 2 2
2 377.32 humidity 80 90 < th dose dependent rect. 2 2
3 377.38 humidity 90 10 < th dose dependent rect. 3 1
12 380.65 humidity 90 10 < th dose independent rect. 3 1
48 392.04 temperature 25 4320 > th dose independent rect. 19 1
49 392.24 radiation 10 4320 > th dose independent rect. 16 1
50 392.48 temperature 25 4320 < th dose independent rect. 19 1
54 392.57 radiation 1 10 < th dose dependent rect. 5 2
59 392.83 temperature 20 270 < th dose dependent rect. 2 1
61 393.00 temperature 25 4320 < th dose independent rect. 19 4
74 393.46 radiation 10 4320 < th dose independent rect. 16 1
83 393.75 temperature 30 4320 < th dose independent rect. 13 1
87 393.77 temperature 25 4320 < th dose independent rect. 22 1
90 394.01 radiation 20 4320 < th dose dependent rect. 16 1
94 394.17 temperature 20 10 < th dose dependent rect. 4 2
98 394.23 temperature 20 10 < th dose dependent rect. 4 4
124 394.49 temperature 20 270 < th dose independent rect. 2 2
125 394.59 radiation 40 4320 < th dose dependent rect. 16 1
131 394.66 temperature 30 4320 > th dose independent rect. 13 1
135 394.72 radiation 1 4320 > th dose dependent rect. 16 1
147 395.11 radiation 40 4320 > th dose independent rect. 14 1
149 395.12 wind 3 10 > th dose dependent rect. 3 1
174 395.43 radiation 40 4320 > th dose independent rect. 14 18
199 395.60 temperature 20 30 < th dose independent rect. 3 4
200 395.60 temperature 20 10 < th dose dependent rect. 6 1
247 395.89 radiation 40 4320 < th dose dependent rect. 14 9
251 395.90 radiation 40 4320 < th dose dependent rect. 14 7
268 395.93 radiation 40 4320 < th dose dependent rect. 14 12
296 396.10 wind 5 1440 < th dose independent rect. 15 1
316 396.12 wind 1 14400 < th dose dependent rect. 10 3
341 396.19 wind 5 1440 > th dose independent rect. 15 1
344 396.19 temperature 30 14400 > th dose dependent rect. 8 1
370 396.21 temperature 25 4320 > th dose dependent rect. 18 1
436 396.34 temperature 30 14400 > th dose independent rect. 8 1
457 396.37 temperature 25 4320 > th dose dependent rect. 16 4
462 396.38 temperature 25 4320 > th dose dependent rect. 16 1
540 396.51 radiation 10 4320 > th dose independent sin 14 NA
585 396.60 wind 5 1440 > th dose independent rect. 14 3
586 396.60 wind 1 14400 < th dose dependent rect. 10 1
591 396.61 temperature 30 14400 < th dose independent rect. 8 1
620 396.73 temperature 30 14400 < th dose independent rect. 22 11
650 396.80 temperature 30 14400 < th dose independent rect. 20 13
653 396.81 radiation 40 4320 < th dose independent rect. 14 1
654 396.81 temperature 30 14400 < th dose independent rect. 5 4
723 396.93 temperature 25 4320 > th dose independent sin 14 NA
760 397.01 temperature 25 4320 > th dose independent rect. 18 16
765 397.02 radiation 40 4320 < th dose dependent sin 14 NA
809 397.11 radiation 10 4320 < th dose independent rect. 16 8
831 397.13 radiation 10 4320 > th dose dependent sin 14 NA
851 397.15 temperature 25 4320 < th dose independent sin 14 NA
863 397.17 radiation 10 4320 < th dose independent rect. 16 10
872 397.18 radiation 30 4320 < th dose independent rect. 14 10
886 397.20 radiation 30 4320 < th dose independent rect. 14 7
898 397.21 radiation 30 4320 < th dose independent rect. 14 5
916 397.23 radiation 30 4320 < th dose independent rect. 14 12
918 397.23 temperature 25 4320 < th dose independent rect. 18 16
919 397.23 radiation 30 4320 < th dose independent rect. 14 16
931 397.27 humidity 90 10 > th dose dependent rect. 6 1
949 397.30 atmosphere 1005 10 < th dose independent rect. 5 1