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Os06g0255200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.61 (0.0324) R2 : 0.123
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.547 (0.0683) R2dN8 : 0.159 R2N8 : 0.123
σ : 0.611
deviance : 171.33
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
141.39 0.559 7.56 0.689 0.413 1.08 -0.321 0.0768 -0.38 6.97 0.637 1390 -- --
140.84 0.553 7.55 0.693 0.366 1.11 -0.34 -- -0.378 6.88 0.55 1362 -- --
141.07 0.553 7.57 0.695 0.361 1.13 -- 0.0558 -0.388 6.74 0.5403 1362 -- --
141.02 0.553 7.56 0.707 0.353 1.16 -- -- -0.383 6.4 0.4785 1356 -- --
145.86 0.563 7.57 0.69 -- 1.27 -- 0.0397 -0.376 -- 0.54 1310 -- --
153.51 0.581 7.58 0.432 0.485 -- -0.133 -- -0.506 7.94 -- -- -- --
153.56 0.58 7.58 0.429 0.484 -- -- -- -0.505 8 -- -- -- --
145.86 0.562 7.57 0.703 -- 1.27 -- -- -0.37 -- 0.5416 1310 -- --
152.26 0.575 7.58 -- 0.358 0.781 -- -- -0.478 6.53 1.26 1327 -- --
166.37 0.603 7.59 0.434 -- -- -- -- -0.499 -- -- -- -- --
158.41 0.589 7.59 -- 0.487 -- -- -- -0.553 7.93 -- -- -- --
154.12 0.578 7.58 -- -- 0.929 -- -- -0.457 -- 1.65 2388 -- --
171.33 0.611 7.61 -- -- -- -- -- -0.547 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 140.75 wind 9 14400 > th dose independent rect. 9 1
3 140.90 wind 7 14400 < th dose independent rect. 11 1
4 140.97 wind 7 14400 > th dose independent rect. 11 1
5 141.15 radiation 1 1440 < th dose dependent rect. 16 15
6 141.26 radiation 1 1440 < th dose independent rect. 16 15
7 141.26 wind 7 14400 > th dose dependent rect. 9 3
9 141.28 temperature 30 90 < th dose dependent rect. 14 18
11 141.36 wind 3 90 < th dose independent rect. 4 21
12 141.39 radiation 1 720 > th dose independent rect. 16 20
15 141.44 radiation 1 1440 > th dose independent rect. 16 15
18 141.51 temperature 25 90 < th dose independent rect. 15 17
21 141.54 radiation 1 1440 < th dose dependent sin 12 NA
24 141.60 radiation 1 1440 < th dose independent sin 13 NA
29 141.62 temperature 25 90 < th dose independent rect. 18 14
43 141.75 radiation 1 1440 > th dose independent sin 13 NA
50 141.86 wind 7 14400 > th dose independent rect. 9 5
51 141.86 wind 7 14400 < th dose independent rect. 9 5
55 141.90 humidity 90 270 > th dose independent rect. 2 22
59 141.93 radiation 1 720 < th dose dependent rect. 4 20
102 142.15 wind 3 90 < th dose dependent rect. 4 21
105 142.19 radiation 1 1440 < th dose dependent rect. 16 10
111 142.21 radiation 1 1440 < th dose dependent rect. 16 3
114 142.22 radiation 1 1440 < th dose dependent rect. 16 7
128 142.28 radiation 1 4320 < th dose dependent rect. 5 2
130 142.29 radiation 20 14400 < th dose independent rect. 20 10
154 142.42 radiation 1 1440 < th dose independent rect. 16 21
170 142.48 wind 9 14400 > th dose independent rect. 3 9
180 142.50 temperature 30 1440 > th dose independent rect. 13 1
186 142.52 radiation 1 1440 < th dose independent rect. 16 10
190 142.52 radiation 1 4320 < th dose dependent rect. 24 7
192 142.52 radiation 1 4320 < th dose dependent rect. 22 9
203 142.55 radiation 1 1440 < th dose independent rect. 16 3
210 142.56 radiation 1 1440 < th dose independent rect. 16 7
235 142.61 humidity 60 270 > th dose dependent rect. 19 12
247 142.64 humidity 50 43200 < th dose independent rect. 9 1
260 142.66 humidity 80 90 > th dose dependent rect. 4 21
261 142.67 wind 9 14400 > th dose independent sin 6 NA
267 142.68 humidity 90 1440 > th dose independent rect. 4 18
285 142.73 humidity 70 43200 < th dose independent rect. 8 1
289 142.73 wind 7 14400 > th dose dependent sin 3 NA
295 142.74 radiation 1 720 < th dose independent rect. 5 19
298 142.74 temperature 20 90 > th dose dependent rect. 1 3
302 142.75 humidity 70 43200 > th dose independent rect. 8 1
309 142.76 humidity 50 43200 > th dose independent rect. 9 1
318 142.77 radiation 1 1440 > th dose independent rect. 16 3
325 142.77 wind 9 14400 < th dose independent rect. 2 10
329 142.77 humidity 90 1440 > th dose independent rect. 4 21
342 142.80 radiation 20 14400 < th dose independent rect. 2 4
354 142.82 temperature 25 90 < th dose independent rect. 5 3
365 142.85 humidity 90 43200 > th dose independent rect. 20 1
369 142.86 radiation 1 43200 > th dose independent rect. 6 2
372 142.87 radiation 1 43200 < th dose independent rect. 6 2
379 142.88 radiation 1 4320 < th dose independent rect. 6 1
381 142.88 wind 9 14400 > th dose dependent sin 6 NA
387 142.89 humidity 50 43200 < th dose independent rect. 16 20
396 142.91 wind 9 14400 < th dose independent sin 6 NA
419 142.95 humidity 90 270 > th dose independent rect. 16 18
424 142.96 radiation 1 4320 > th dose independent rect. 6 1
428 142.96 temperature 10 270 > th dose dependent rect. 17 10
431 142.97 humidity 50 43200 > th dose independent rect. 16 20
434 142.97 wind 9 43200 < th dose dependent rect. 12 1
464 143.02 wind 7 43200 > th dose independent rect. 12 18
467 143.02 radiation 1 1440 < th dose dependent rect. 4 15
471 143.02 humidity 50 43200 < th dose dependent rect. 15 20
478 143.03 wind 7 43200 < th dose independent rect. 12 17
485 143.03 radiation 1 1440 < th dose dependent rect. 24 19
488 143.03 radiation 1 1440 < th dose dependent rect. 22 22
511 143.05 humidity 90 43200 < th dose independent rect. 20 1
514 143.05 radiation 1 1440 < th dose dependent no NA NA
524 143.06 humidity 90 270 > th dose independent sin 8 NA
548 143.07 humidity 50 43200 < th dose dependent rect. 4 7
557 143.08 wind 9 14400 < th dose independent rect. 23 14
575 143.09 humidity 50 43200 < th dose dependent rect. 9 1
581 143.09 humidity 80 270 > th dose dependent rect. 2 22
585 143.10 atmosphere 1015 14400 < th dose independent rect. 23 2
594 143.11 atmosphere 1015 14400 > th dose independent rect. 23 2
596 143.11 atmosphere 1015 14400 < th dose independent rect. 22 6
610 143.12 atmosphere 1015 14400 > th dose independent rect. 22 4
611 143.12 atmosphere 1015 14400 > th dose independent rect. 20 7
649 143.14 humidity 50 43200 < th dose independent sin 10 NA
667 143.14 humidity 90 43200 > th dose dependent rect. 19 2
675 143.15 atmosphere 1015 14400 > th dose independent sin 10 NA
678 143.15 radiation 1 43200 < th dose independent rect. 4 5
706 143.15 humidity 90 270 < th dose independent rect. 22 22
715 143.16 radiation 1 43200 > th dose independent rect. 4 5
743 143.17 atmosphere 1015 14400 < th dose independent sin 9 NA
768 143.17 humidity 50 43200 < th dose dependent rect. 8 3
827 143.20 atmosphere 1015 14400 < th dose independent rect. 2 2
883 143.21 humidity 50 43200 > th dose independent rect. 17 18
886 143.21 humidity 90 270 > th dose independent rect. 11 22
887 143.21 atmosphere 1015 14400 > th dose dependent rect. 23 8
911 143.22 humidity 50 43200 < th dose independent rect. 17 18
920 143.23 atmosphere 1015 14400 < th dose independent rect. 10 1
947 143.23 wind 5 43200 > th dose dependent rect. 11 18