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Os06g0255100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Isopenicillin N synthase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.47 (0.0211) R2 : 0.759
β1 : 1.1 (0.0772) R2dD : 0.111 R2D : 0.0922
β2 : 1.91 (0.0539) R2dC : 0.667 R2C : 0.651
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0973 (0.045) R2dN8 : 0.00332 R2N8 : -0.00687
σ : 0.396
deviance : 71.56
__
_____
C
peak time of C : 16.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.51 0.362 9.42 1.42 1.87 0.894 0.181 -0.219 0.311 16.3 27.31 1411 -- --
59.56 0.359 9.42 1.37 1.87 0.906 0.165 -- 0.302 16.3 27.05 1408 -- --
59.6 0.36 9.42 1.43 1.87 0.89 -- -0.226 0.312 16.3 27.6 1411 -- --
59.63 0.36 9.42 1.38 1.87 0.905 -- -- 0.301 16.3 27.25 1401 -- --
242.39 0.725 9.4 1.44 -- 1.16 -- 0.158 0.337 -- 27.86 2644 -- --
71.49 0.396 9.47 1.09 1.91 -- 0.161 -- 0.0965 16.3 -- -- -- --
71.56 0.396 9.47 1.1 1.91 -- -- -- 0.0973 16.3 -- -- -- --
238.39 0.719 9.4 1.43 -- 1.35 -- -- 0.288 -- 37.12 1204 -- --
101.92 0.47 9.49 -- 1.87 0.267 -- -- 0.0136 16.3 76.61 1254 -- --
269.31 0.767 9.46 1.02 -- -- -- -- 0.0465 -- -- -- -- --
103.25 0.475 9.5 -- 1.89 -- -- -- -0.0248 16.3 -- -- -- --
257.67 0.75 9.53 -- -- -1.6 -- -- -0.247 -- 37.12 1204 -- --
296.76 0.804 9.48 -- -- -- -- -- -0.0667 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 54.29 temperature 10.0 270 > th dose dependent rect. 16 14
3 54.79 radiation 30.0 270 < th dose independent rect. 15 14
5 54.99 wind 9.0 270 < th dose independent rect. 15 14
8 55.08 temperature 10.0 270 > th dose independent rect. 5 10
9 55.08 atmosphere 1015.0 270 < th dose independent rect. 5 10
10 55.08 temperature 10.0 270 > th dose independent rect. 15 14
11 55.09 temperature 10.0 90 > th dose dependent rect. 3 19
12 55.12 precipitation 0.1 270 < th dose independent rect. 5 10
13 55.12 precipitation 0.1 270 < th dose dependent rect. 5 10
20 55.19 wind 9.0 270 < th dose independent rect. 5 10
21 55.38 atmosphere 995.0 270 > th dose independent rect. 5 10
22 55.38 temperature 30.0 90 < th dose dependent rect. 21 6
23 55.40 temperature 10.0 270 > th dose dependent rect. 1 20
26 55.45 temperature 10.0 720 > th dose dependent rect. 18 18
39 55.72 atmosphere 1015.0 270 < th dose independent rect. 15 14
40 55.76 temperature 10.0 10 > th dose dependent rect. 3 19
56 56.23 temperature 10.0 720 > th dose dependent rect. 18 11
57 56.24 temperature 30.0 10 < th dose dependent rect. 22 5
77 56.47 temperature 30.0 90 < th dose dependent rect. 11 16
88 56.68 temperature 30.0 270 < th dose dependent rect. 22 2
93 56.84 atmosphere 995.0 270 > th dose independent rect. 16 14
106 57.02 temperature 30.0 270 < th dose dependent rect. 9 16
108 57.04 precipitation 0.1 270 < th dose independent rect. 15 14
109 57.04 radiation 40.0 270 < th dose dependent rect. 16 14
110 57.04 precipitation 0.1 270 < th dose dependent rect. 15 14
115 57.12 atmosphere 1015.0 270 < th dose independent rect. 24 21
128 57.26 temperature 30.0 90 < th dose dependent rect. 9 18
129 57.27 precipitation 0.1 270 < th dose independent rect. 11 14
130 57.27 precipitation 0.1 270 < th dose dependent rect. 11 14
137 57.38 wind 9.0 270 < th dose independent rect. 1 19
141 57.42 temperature 10.0 720 > th dose dependent rect. 24 5
146 57.45 precipitation 0.1 90 < th dose independent rect. 22 5
147 57.45 wind 9.0 270 < th dose independent rect. 24 21
148 57.45 precipitation 0.1 90 < th dose dependent rect. 22 5
150 57.47 wind 9.0 90 < th dose independent rect. 22 5
151 57.47 temperature 10.0 90 > th dose independent rect. 22 5
152 57.47 temperature 30.0 90 < th dose independent rect. 22 5
153 57.47 humidity 50.0 90 > th dose independent rect. 22 5
156 57.47 atmosphere 995.0 90 > th dose independent rect. 22 5
157 57.47 radiation 1.0 90 < th dose independent rect. 22 5
162 57.47 temperature 10.0 90 > th dose independent rect. 3 19
163 57.47 atmosphere 1015.0 90 < th dose independent rect. 3 19
164 57.47 radiation 1.0 90 < th dose dependent rect. 22 5
176 57.51 radiation 1.0 270 > th dose independent rect. 6 10
178 57.52 temperature 10.0 270 > th dose independent rect. 20 5
179 57.52 temperature 30.0 270 < th dose independent rect. 20 5
180 57.52 humidity 50.0 270 > th dose independent rect. 20 5
183 57.52 atmosphere 995.0 270 > th dose independent rect. 20 5
184 57.52 radiation 1.0 270 < th dose independent rect. 20 5
189 57.52 temperature 10.0 270 > th dose independent rect. 1 19
191 57.52 radiation 1.0 270 < th dose dependent rect. 20 5
200 57.56 temperature 10.0 270 > th dose independent rect. 21 3
201 57.56 temperature 30.0 270 < th dose independent rect. 21 3
202 57.56 humidity 50.0 270 > th dose independent rect. 21 3
205 57.56 atmosphere 995.0 270 > th dose independent rect. 21 3
206 57.56 radiation 1.0 270 < th dose independent rect. 21 3
211 57.56 precipitation 0.1 270 < th dose independent rect. 21 3
212 57.56 wind 9.0 270 < th dose independent rect. 20 5
227 57.56 temperature 10.0 270 > th dose independent rect. 24 21
228 57.56 radiation 1.0 270 < th dose dependent rect. 21 3
233 57.56 precipitation 0.1 270 < th dose dependent rect. 21 3
240 57.58 wind 9.0 90 < th dose independent rect. 3 19
241 57.58 temperature 10.0 720 > th dose dependent sin 11 NA
244 57.60 wind 9.0 270 < th dose independent rect. 21 3
252 57.69 temperature 30.0 90 < th dose dependent rect. 13 14
258 57.71 radiation 20.0 90 < th dose dependent rect. 17 16
285 57.77 wind 1.0 270 > th dose independent rect. 21 3
299 57.83 atmosphere 995.0 90 > th dose independent rect. 3 19
300 57.83 humidity 50.0 90 > th dose dependent rect. 22 5
302 57.84 precipitation 0.1 270 < th dose independent rect. 1 10
305 57.84 precipitation 0.1 270 < th dose dependent rect. 1 10
309 57.86 wind 9.0 270 < th dose independent rect. 1 10
315 57.89 humidity 50.0 270 > th dose independent rect. 1 10
320 57.91 humidity 50.0 270 > th dose dependent rect. 22 2
321 57.91 temperature 30.0 90 < th dose dependent rect. 15 12
322 57.92 wind 1.0 270 > th dose independent rect. 20 5
329 57.94 temperature 10.0 270 > th dose independent rect. 1 10
330 57.94 atmosphere 995.0 270 > th dose independent rect. 1 10
331 57.94 atmosphere 1015.0 270 < th dose independent rect. 1 10
332 57.94 temperature 10.0 270 > th dose independent rect. 11 14
338 57.97 wind 1.0 90 > th dose independent rect. 22 5
362 57.99 temperature 30.0 10 < th dose dependent rect. 12 15
365 58.01 atmosphere 995.0 270 > th dose dependent rect. 22 2
378 58.05 radiation 20.0 90 < th dose dependent rect. 3 19
381 58.07 precipitation 0.1 10 < th dose independent rect. 22 5
383 58.07 precipitation 0.1 10 < th dose dependent rect. 22 5
391 58.10 precipitation 0.1 270 < th dose independent rect. 1 19
392 58.10 precipitation 0.1 10 < th dose independent rect. 3 19
393 58.10 precipitation 0.1 270 < th dose dependent rect. 1 19
394 58.10 precipitation 0.1 10 < th dose dependent rect. 3 19
395 58.11 temperature 10.0 720 > th dose dependent rect. 17 4
396 58.11 atmosphere 995.0 90 > th dose dependent rect. 22 5
399 58.12 wind 7.0 10 < th dose independent rect. 22 5
401 58.12 temperature 10.0 10 > th dose independent rect. 22 5
402 58.12 temperature 30.0 10 < th dose independent rect. 22 5
403 58.12 humidity 50.0 10 > th dose independent rect. 22 5
406 58.12 atmosphere 995.0 10 > th dose independent rect. 22 5
407 58.12 radiation 1.0 10 < th dose independent rect. 22 5
413 58.12 temperature 10.0 10 > th dose independent rect. 3 19
415 58.12 atmosphere 1015.0 10 < th dose independent rect. 3 19
419 58.12 radiation 1.0 10 < th dose dependent rect. 22 5
433 58.15 temperature 10.0 270 > th dose dependent rect. 24 10
436 58.16 temperature 10.0 1440 > th dose dependent rect. 5 1
439 58.17 wind 9.0 10 < th dose independent rect. 3 19
440 58.17 temperature 30.0 10 < th dose dependent rect. 9 18
452 58.21 humidity 50.0 10 > th dose dependent rect. 22 5
483 58.26 temperature 25.0 1440 < th dose dependent rect. 5 1
491 58.28 atmosphere 995.0 270 > th dose independent rect. 1 19
512 58.31 precipitation 0.1 270 < th dose independent rect. 24 21
513 58.31 precipitation 0.1 270 < th dose dependent rect. 24 21
520 58.35 temperature 10.0 1440 > th dose dependent rect. 3 4
534 58.39 atmosphere 995.0 10 > th dose independent rect. 3 19
542 58.40 temperature 25.0 1440 < th dose dependent rect. 3 4
544 58.40 temperature 25.0 1440 < th dose dependent rect. 3 7
555 58.43 wind 9.0 270 < th dose independent rect. 11 14
571 58.45 radiation 40.0 270 < th dose dependent rect. 1 9
574 58.46 precipitation 0.1 90 < th dose independent rect. 3 19
580 58.46 temperature 30.0 1440 < th dose dependent rect. 20 11
581 58.46 temperature 30.0 10 < th dose dependent rect. 14 13
583 58.46 precipitation 0.1 90 < th dose dependent rect. 3 19
602 58.49 atmosphere 995.0 10 > th dose dependent rect. 22 5
636 58.51 temperature 25.0 1440 < th dose dependent rect. 20 14
640 58.52 wind 1.0 270 > th dose independent rect. 5 10
675 58.55 temperature 10.0 720 > th dose dependent rect. 9 20
679 58.56 temperature 25.0 1440 < th dose dependent rect. 23 11
733 58.60 temperature 10.0 1440 > th dose dependent rect. 20 1
740 58.60 temperature 25.0 1440 < th dose dependent rect. 23 8
756 58.62 radiation 1.0 90 > th dose independent sin 0 NA
768 58.63 atmosphere 995.0 270 > th dose independent rect. 24 21
779 58.65 radiation 1.0 14400 < th dose independent rect. 9 8
782 58.65 temperature 10.0 1440 > th dose dependent rect. 20 3
810 58.67 temperature 30.0 90 < th dose dependent rect. 17 10
814 58.68 temperature 25.0 1440 < th dose dependent sin 8 NA
829 58.69 temperature 10.0 10 > th dose dependent rect. 16 14
932 58.76 temperature 30.0 1440 < th dose dependent rect. 20 1
933 58.76 temperature 30.0 1440 < th dose dependent rect. 20 3
934 58.76 temperature 30.0 1440 < th dose dependent rect. 20 5
951 58.77 radiation 1.0 14400 > th dose independent rect. 9 8
985 58.79 humidity 50.0 10 > th dose independent rect. 3 19