Os06g0247900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4).
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Os06g0247900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Endo-beta-1,4-glucanase precursor (EC 3.2.1.4).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 225.89 | 0.706 | 7.46 | -0.071 | 1.74 | -2.15 | 1.35 | 1.15 | -0.0313 | 7.69 | 0.8669 | 1526 | -- | -- |
| 226.36 | 0.701 | 7.45 | 0.0144 | 1.74 | -2.4 | 1.23 | -- | -0.0223 | 7.63 | 0.6786 | 1523 | -- | -- |
| 230.65 | 0.707 | 7.45 | 0.0172 | 1.74 | -2.33 | -- | 0.219 | -0.0242 | 7.75 | 0.6803 | 1516 | -- | -- |
| 230.53 | 0.707 | 7.44 | 0.048 | 1.74 | -2.3 | -- | -- | -0.00609 | 7.84 | 0.67 | 1507 | -- | -- |
| 375.12 | 0.907 | 7.43 | 0.538 | -- | -0.984 | -- | 0.427 | 0.278 | -- | 0.6803 | 1516 | -- | -- |
| 275.61 | 0.778 | 7.38 | 0.545 | 1.91 | -- | 0.916 | -- | 0.27 | 8.45 | -- | -- | -- | -- |
| 278.26 | 0.781 | 7.38 | 0.574 | 1.91 | -- | -- | -- | 0.27 | 8.48 | -- | -- | -- | -- |
| 376.28 | 0.907 | 7.43 | 0.546 | -- | -0.981 | -- | -- | 0.281 | -- | 0.67 | 1507 | -- | -- |
| 230.58 | 0.707 | 7.44 | -- | 1.74 | -2.32 | -- | -- | -0.0119 | 7.87 | 0.6729 | 1504 | -- | -- |
| 481.7 | 1.03 | 7.43 | 0.583 | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
| 286.96 | 0.792 | 7.39 | -- | 1.91 | -- | -- | -- | 0.206 | 8.46 | -- | -- | -- | -- |
| 384.13 | 0.916 | 7.44 | -- | -- | -0.986 | -- | -- | 0.22 | -- | 0.67 | 1507 | -- | -- |
| 490.66 | 1.03 | 7.44 | -- | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 216.50 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 2 | 218.29 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 3 | 218.45 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 5 | 218.62 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 9 | 218.80 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 10 | 218.88 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 14 | 219.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 20 | 219.67 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 21 | 219.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 25 | 219.73 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 39 | 219.98 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 43 | 220.11 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 49 | 220.28 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 50 | 220.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 51 | 220.30 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 53 | 220.32 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 55 | 220.39 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 20 | 7 |
| 56 | 220.40 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 22 | 4 |
| 59 | 220.42 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 60 | 220.42 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 64 | 220.44 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 66 | 220.44 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 67 | 220.46 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 72 | 220.49 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 77 | 220.51 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 19 | 8 |
| 104 | 220.63 | atmosphere | 1015.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 115 | 220.69 | atmosphere | 1015.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 128 | 220.72 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 232 | 221.08 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 234 | 221.09 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 235 | 221.09 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 247 | 221.14 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 258 | 221.18 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 318 | 221.45 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 319 | 221.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 320 | 221.47 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 329 | 221.55 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 379 | 221.66 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 382 | 221.66 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 385 | 221.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 397 | 221.68 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 398 | 221.68 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 405 | 221.68 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 417 | 221.69 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 2 | 11 |
| 419 | 221.70 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 431 | 221.71 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 433 | 221.72 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 444 | 221.73 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 1 | 4 |
| 456 | 221.76 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 464 | 221.78 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 507 | 221.79 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 508 | 221.79 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 5 | 7 |
| 540 | 221.82 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 633 | 222.16 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 651 | 222.24 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 667 | 222.33 | humidity | 80.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 690 | 222.42 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 703 | 222.48 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 762 | 222.83 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 784 | 223.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 787 | 223.04 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 790 | 223.04 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 801 | 223.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 16 |
| 809 | 223.19 | humidity | 80.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 852 | 223.42 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 855 | 223.45 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 860 | 223.47 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 16 |
| 890 | 223.64 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 916 | 223.78 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 921 | 223.80 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 922 | 223.80 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 20 |
| 931 | 223.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 935 | 223.85 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 938 | 223.87 | wind | 5.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 958 | 223.95 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 959 | 223.96 | atmosphere | 1015.0 | 14400 | < th | dose independent | no | NA | NA |
| 962 | 223.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 11 | 20 |