Os06g0247800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dynamin-like protein (Fragment).
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Os06g0247800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dynamin-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.59 | 0.145 | 11.4 | -0.159 | 0.376 | 0.295 | -0.175 | -0.117 | 0.193 | 0.256 | 90.34 | 318 | -- | -- |
| 9.6 | 0.144 | 11.4 | -0.164 | 0.381 | 0.302 | -0.176 | -- | 0.193 | 0.242 | 90.6 | 342 | -- | -- |
| 9.61 | 0.144 | 11.4 | -0.139 | 0.386 | 0.351 | -- | -0.304 | 0.19 | 0.474 | 92.78 | 284 | -- | -- |
| 9.67 | 0.145 | 11.4 | -0.152 | 0.391 | 0.373 | -- | -- | 0.19 | 0.393 | 92.86 | 332 | -- | -- |
| 16.18 | 0.188 | 11.4 | -0.164 | -- | 0.391 | -- | -0.232 | 0.222 | -- | 89.79 | 46 | -- | -- |
| 11.03 | 0.156 | 11.4 | -0.134 | 0.416 | -- | -0.156 | -- | 0.147 | 1.32 | -- | -- | -- | -- |
| 11.13 | 0.156 | 11.4 | -0.129 | 0.416 | -- | -- | -- | 0.148 | 1.3 | -- | -- | -- | -- |
| 12.36 | 0.164 | 11.4 | -0.135 | -- | 0.45 | -- | -- | 0.159 | -- | 60.79 | 6 | -- | -- |
| 10.22 | 0.149 | 11.4 | -- | 0.394 | 0.409 | -- | -- | 0.201 | 0.442 | 93.56 | 328 | -- | -- |
| 21.82 | 0.218 | 11.4 | -0.112 | -- | -- | -- | -- | 0.157 | -- | -- | -- | -- | -- |
| 11.57 | 0.159 | 11.4 | -- | 0.414 | -- | -- | -- | 0.162 | 1.29 | -- | -- | -- | -- |
| 12.67 | 0.166 | 11.4 | -- | -- | 0.432 | -- | -- | 0.186 | -- | 60.82 | 2 | -- | -- |
| 22.15 | 0.22 | 11.4 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.34 | humidity | 60 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 2 | 9.35 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 14 | 9.47 | humidity | 90 | 10 | > th | dose dependent | sin | 22 | NA |
| 21 | 9.50 | humidity | 90 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 22 | 9.51 | humidity | 90 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 33 | 9.54 | humidity | 90 | 90 | > th | dose independent | rect. | 4 | 18 |
| 39 | 9.55 | humidity | 60 | 90 | > th | dose dependent | rect. | 17 | 18 |
| 40 | 9.55 | humidity | 60 | 90 | > th | dose dependent | rect. | 13 | 22 |
| 65 | 9.58 | humidity | 50 | 270 | > th | dose dependent | rect. | 17 | 15 |
| 71 | 9.58 | humidity | 60 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 122 | 9.63 | humidity | 90 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 136 | 9.64 | humidity | 90 | 270 | > th | dose dependent | rect. | 15 | 18 |
| 152 | 9.65 | humidity | 90 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 172 | 9.65 | humidity | 60 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 177 | 9.66 | humidity | 90 | 270 | > th | dose dependent | no | NA | NA |
| 197 | 9.66 | humidity | 90 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 244 | 9.69 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 341 | 9.74 | humidity | 50 | 270 | > th | dose dependent | rect. | 12 | 9 |
| 361 | 9.74 | humidity | 60 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 365 | 9.75 | humidity | 60 | 90 | > th | dose dependent | rect. | 7 | 15 |
| 390 | 9.76 | humidity | 90 | 90 | > th | dose independent | sin | 23 | NA |
| 391 | 9.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 430 | 9.78 | humidity | 60 | 90 | > th | dose dependent | no | NA | NA |
| 431 | 9.78 | radiation | 1 | 270 | < th | dose dependent | sin | 0 | NA |
| 528 | 9.81 | humidity | 70 | 90 | > th | dose independent | rect. | 3 | 20 |
| 562 | 9.82 | humidity | 90 | 10 | > th | dose independent | sin | 22 | NA |
| 563 | 9.82 | humidity | 90 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 564 | 9.82 | humidity | 90 | 270 | > th | dose dependent | sin | 7 | NA |
| 570 | 9.82 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 592 | 9.83 | humidity | 70 | 270 | > th | dose independent | rect. | 2 | 18 |
| 596 | 9.83 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 621 | 9.83 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 628 | 9.84 | radiation | 1 | 270 | < th | dose independent | sin | 0 | NA |
| 665 | 9.85 | humidity | 70 | 90 | > th | dose independent | rect. | 4 | 18 |
| 693 | 9.86 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 18 |
| 694 | 9.86 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 20 |
| 756 | 9.87 | humidity | 60 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 775 | 9.88 | humidity | 90 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 776 | 9.88 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 808 | 9.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 815 | 9.89 | radiation | 10 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 852 | 9.90 | humidity | 60 | 270 | > th | dose dependent | rect. | 15 | 5 |
| 854 | 9.90 | humidity | 90 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 857 | 9.90 | humidity | 90 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 858 | 9.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 892 | 9.91 | radiation | 1 | 270 | < th | dose independent | rect. | 4 | 15 |
| 903 | 9.91 | humidity | 50 | 10 | > th | dose dependent | rect. | 14 | 9 |
| 955 | 9.92 | humidity | 60 | 90 | > th | dose dependent | sin | 23 | NA |
| 957 | 9.92 | humidity | 70 | 270 | > th | dose dependent | rect. | 17 | 3 |
| 969 | 9.92 | humidity | 90 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 975 | 9.92 | humidity | 90 | 270 | > th | dose dependent | rect. | 23 | 15 |