Os06g0239700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0239700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.91 | 0.527 | 7.03 | -0.0246 | 1.11 | 1.42 | -0.319 | -0.981 | -0.268 | 10.2 | 10.48 | 586 | -- | -- |
| 126.55 | 0.524 | 7.01 | 0.138 | 1.11 | 1.4 | -0.168 | -- | -0.224 | 10.2 | 10.94 | 584 | -- | -- |
| 126.25 | 0.523 | 7.03 | -0.00141 | 1.1 | 1.43 | -- | -0.798 | -0.26 | 10.1 | 10.14 | 550 | -- | -- |
| 126.67 | 0.524 | 7.01 | 0.13 | 1.11 | 1.41 | -- | -- | -0.224 | 10.2 | 11.03 | 587 | -- | -- |
| 152.12 | 0.578 | 7.07 | -0.0277 | -- | 1.79 | -- | -1.07 | -0.298 | -- | 10.14 | 550 | -- | -- |
| 149.9 | 0.574 | 6.97 | 0.473 | 0.878 | -- | -0.219 | -- | -0.0108 | 11.3 | -- | -- | -- | -- |
| 150.1 | 0.574 | 6.97 | 0.465 | 0.879 | -- | -- | -- | -0.0115 | 11.3 | -- | -- | -- | -- |
| 153.1 | 0.579 | 7.05 | 0.12 | -- | 1.77 | -- | -- | -0.257 | -- | 11.03 | 587 | -- | -- |
| 127.07 | 0.525 | 7.02 | -- | 1.12 | 1.47 | -- | -- | -0.246 | 10.2 | 11.01 | 588 | -- | -- |
| 198.49 | 0.658 | 6.99 | 0.443 | -- | -- | -- | -- | -0.0198 | -- | -- | -- | -- | -- |
| 155.79 | 0.584 | 6.98 | -- | 0.875 | -- | -- | -- | -0.0632 | 11.3 | -- | -- | -- | -- |
| 153.46 | 0.579 | 7.05 | -- | -- | 1.8 | -- | -- | -0.274 | -- | 11.01 | 588 | -- | -- |
| 203.65 | 0.666 | 7.01 | -- | -- | -- | -- | -- | -0.0689 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.22 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 3 | 112.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 4 | 112.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 7 | 113.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 14 | 114.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 18 | 114.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 36 | 115.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 46 | 116.17 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 52 | 116.41 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 59 | 116.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 85 | 117.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 11 |
| 121 | 117.67 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 249 | 119.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 306 | 120.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 345 | 120.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 6 |
| 406 | 120.86 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 438 | 121.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 586 | 122.12 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 642 | 122.53 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 682 | 122.83 | temperature | 15 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 686 | 122.86 | temperature | 15 | 270 | > th | dose dependent | sin | 0 | NA |
| 710 | 123.04 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 8 |
| 723 | 123.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 740 | 123.18 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 12 |
| 831 | 123.72 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 6 |
| 835 | 123.74 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 16 |
| 875 | 123.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 1 |
| 892 | 124.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 895 | 124.13 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 898 | 124.15 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 925 | 124.25 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 939 | 124.33 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 965 | 124.50 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 14 |
| 1000 | 124.70 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |