Os06g0238700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os06g0238700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 254.01 | 0.749 | 6.99 | -1.03 | 1.43 | -2.5 | -0.909 | -5.17 | 0.229 | 19.2 | 16.4 | 189 | 2.53 | 3.15 |
| 266.89 | 0.761 | 6.97 | -0.669 | 1.47 | -2.63 | -0.157 | -- | 0.262 | 19 | 15.79 | 186 | 2.63 | 3.18 |
| 255.45 | 0.744 | 6.99 | -0.941 | 1.43 | -2.53 | -- | -4.34 | 0.233 | 19.2 | 16.29 | 184 | 2.57 | 3.15 |
| 264.4 | 0.757 | 6.96 | -0.638 | 1.4 | -2.72 | -- | -- | 0.29 | 19.1 | 14.42 | 169 | 2.85 | 2.87 |
| 308.96 | 0.819 | 6.94 | -0.867 | -- | -3.28 | -- | -3.72 | 0.3 | -- | 7.199 | 278 | 1.58 | 4.12 |
| 386.1 | 0.921 | 7.01 | -0.78 | 2.66 | -- | 1.12 | -- | 0.181 | 18.3 | -- | -- | -- | -- |
| 389.19 | 0.924 | 7.01 | -0.795 | 2.66 | -- | -- | -- | 0.184 | 18.4 | -- | -- | -- | -- |
| 309.59 | 0.819 | 6.9 | -0.609 | -- | -3.64 | -- | -- | 0.412 | -- | 11.46 | 275 | 1.52 | 4.33 |
| 275.09 | 0.772 | 6.94 | -- | 1.38 | -2.78 | -- | -- | 0.361 | 19.1 | 14.63 | 169 | 2.83 | 2.88 |
| 757.37 | 1.29 | 6.96 | -0.865 | -- | -- | -- | -- | 0.127 | -- | -- | -- | -- | -- |
| 405.84 | 0.942 | 6.99 | -- | 2.67 | -- | -- | -- | 0.273 | 18.3 | -- | -- | -- | -- |
| 318.65 | 0.831 | 6.88 | -- | -- | -3.67 | -- | -- | 0.475 | -- | 11.12 | 263 | 1.44 | 4.51 |
| 777.09 | 1.3 | 6.93 | -- | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 266.79 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 2 | 266.82 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 4 | 269.14 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 14 | 273.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 20 | 274.47 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 25 | 274.99 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 34 | 276.50 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 39 | 277.17 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 55 | 279.42 | wind | 5.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 61 | 279.79 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 64 | 280.09 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 4 | 3 |
| 66 | 280.17 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 67 | 280.17 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 80 | 280.71 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 83 | 281.25 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 85 | 281.58 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 90 | 281.84 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 91 | 281.86 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 21 |
| 93 | 281.90 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 98 | 282.18 | temperature | 15.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 99 | 282.25 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 122 | 283.18 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 124 | 283.18 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 125 | 283.18 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 127 | 283.18 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 129 | 283.18 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 135 | 283.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 142 | 283.89 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 153 | 284.29 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 155 | 284.48 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 157 | 284.56 | humidity | 80.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 164 | 285.00 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 166 | 285.12 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 174 | 285.23 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 3 |
| 175 | 285.23 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 178 | 285.25 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 180 | 285.25 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 181 | 285.25 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 184 | 285.25 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 3 |
| 185 | 285.25 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 186 | 285.25 | radiation | 20.0 | 10 | < th | dose independent | rect. | 4 | 3 |
| 189 | 285.25 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 196 | 285.46 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 212 | 286.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 237 | 286.51 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 244 | 286.75 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 257 | 287.43 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 258 | 287.43 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 276 | 287.71 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 21 |
| 302 | 288.18 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 312 | 288.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 333 | 289.21 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 358 | 289.49 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 405 | 290.53 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 21 |
| 407 | 290.53 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 480 | 292.17 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 519 | 292.79 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 544 | 293.51 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 553 | 293.60 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 565 | 293.71 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 595 | 294.30 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 15 |
| 599 | 294.38 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 614 | 294.56 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 696 | 295.68 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 816 | 297.52 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 21 |
| 905 | 298.46 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 959 | 298.93 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 10 | NA |
| 966 | 298.96 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 17 | 18 |
| 967 | 298.97 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 17 | 20 |
| 969 | 298.98 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 994 | 299.11 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 12 |