Os06g0238300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FMN-binding split barrel domain containing protein.
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Os06g0238300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FMN-binding split barrel domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.08 | 0.407 | 10.3 | -0.596 | 0.422 | -0.825 | 0.238 | -0.139 | -0.362 | 1.6 | 995.5 | 8 | -- | -- |
| 75.09 | 0.407 | 10.3 | -0.6 | 0.422 | -0.84 | 0.239 | -- | -0.36 | 1.6 | 995.4 | 7 | -- | -- |
| 75.28 | 0.407 | 10.3 | -0.604 | 0.424 | -0.825 | -- | -0.141 | -0.364 | 1.77 | 995.5 | 8 | -- | -- |
| 75.3 | 0.407 | 10.3 | -0.608 | 0.424 | -0.835 | -- | -- | -0.362 | 1.77 | 995.5 | 8 | -- | -- |
| 85.87 | 0.432 | 10.3 | -0.596 | -- | -0.811 | -- | 0.0785 | -0.357 | -- | 995.5 | 186 | -- | -- |
| 82.95 | 0.427 | 10.3 | -0.554 | 0.407 | -- | 0.222 | -- | -0.475 | 1.3 | -- | -- | -- | -- |
| 83.13 | 0.427 | 10.3 | -0.562 | 0.408 | -- | -- | -- | -0.476 | 1.48 | -- | -- | -- | -- |
| 85.88 | 0.432 | 10.3 | -0.595 | -- | -0.807 | -- | -- | -0.357 | -- | 995.5 | 186 | -- | -- |
| 84.97 | 0.432 | 10.3 | -- | 0.411 | -0.754 | -- | -- | -0.305 | 1.7 | 995.6 | 9 | -- | -- |
| 93.36 | 0.451 | 10.3 | -0.546 | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
| 91.46 | 0.447 | 10.3 | -- | 0.398 | -- | -- | -- | -0.414 | 1.43 | -- | -- | -- | -- |
| 95.09 | 0.454 | 10.3 | -- | -- | -0.723 | -- | -- | -0.302 | -- | 995.6 | 107 | -- | -- |
| 101.22 | 0.47 | 10.3 | -- | -- | -- | -- | -- | -0.407 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.05 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 2 | 71.44 | temperature | 25 | 270 | < th | dose independent | rect. | 16 | 15 |
| 4 | 71.55 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 6 | 71.61 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 7 | 71.62 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 14 | 71.79 | radiation | 10 | 720 | > th | dose independent | rect. | 16 | 1 |
| 15 | 71.82 | wind | 9 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 26 | 72.20 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 30 | 72.26 | radiation | 10 | 720 | > th | dose independent | rect. | 16 | 14 |
| 31 | 72.26 | wind | 3 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 45 | 72.34 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 52 | 72.41 | wind | 9 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 54 | 72.45 | humidity | 80 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 59 | 72.50 | temperature | 25 | 270 | > th | dose dependent | sin | 11 | NA |
| 62 | 72.51 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 65 | 72.52 | humidity | 80 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 72 | 72.56 | wind | 9 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 103 | 72.66 | temperature | 25 | 270 | < th | dose independent | sin | 12 | NA |
| 112 | 72.68 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 122 | 72.72 | wind | 9 | 14400 | < th | dose independent | sin | 3 | NA |
| 125 | 72.72 | wind | 7 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 168 | 72.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 169 | 72.92 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 188 | 72.97 | humidity | 80 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 207 | 73.04 | wind | 9 | 14400 | > th | dose independent | sin | 3 | NA |
| 212 | 73.05 | atmosphere | 995 | 10 | > th | dose dependent | sin | 16 | NA |
| 214 | 73.06 | temperature | 25 | 270 | > th | dose independent | sin | 12 | NA |
| 217 | 73.06 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 17 |
| 240 | 73.11 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 259 | 73.17 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 268 | 73.20 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 273 | 73.20 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 293 | 73.25 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 8 |
| 297 | 73.26 | wind | 9 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 300 | 73.29 | humidity | 80 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 339 | 73.39 | wind | 5 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 346 | 73.41 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 357 | 73.43 | wind | 9 | 14400 | > th | dose dependent | sin | 3 | NA |
| 361 | 73.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 362 | 73.44 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 368 | 73.47 | wind | 5 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 392 | 73.51 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 401 | 73.53 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 419 | 73.55 | temperature | 25 | 270 | > th | dose dependent | rect. | 20 | 5 |
| 422 | 73.55 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 427 | 73.56 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 15 |
| 434 | 73.57 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 4 | 23 |
| 448 | 73.59 | wind | 9 | 14400 | > th | dose independent | rect. | 24 | 20 |
| 484 | 73.63 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 530 | 73.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 7 |
| 537 | 73.73 | atmosphere | 1015 | 10 | < th | dose dependent | sin | 15 | NA |
| 540 | 73.73 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 551 | 73.75 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 568 | 73.77 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 600 | 73.84 | wind | 9 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 638 | 73.92 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 8 |
| 654 | 73.94 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 10 |
| 664 | 73.96 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 692 | 73.97 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 698 | 73.98 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 706 | 74.01 | wind | 9 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 715 | 74.03 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 12 | 17 |
| 734 | 74.06 | wind | 9 | 14400 | > th | dose dependent | rect. | 24 | 20 |
| 742 | 74.07 | temperature | 20 | 10 | > th | dose dependent | rect. | 18 | 9 |
| 769 | 74.10 | wind | 9 | 14400 | > th | dose independent | rect. | 19 | 21 |
| 776 | 74.10 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 9 | 16 |
| 796 | 74.14 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 2 |
| 802 | 74.15 | wind | 9 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 851 | 74.20 | wind | 3 | 4320 | > th | dose dependent | rect. | 13 | 3 |
| 865 | 74.22 | temperature | 25 | 90 | > th | dose independent | rect. | 20 | 7 |
| 880 | 74.25 | wind | 9 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 883 | 74.25 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 11 | 14 |
| 890 | 74.27 | temperature | 20 | 30 | > th | dose dependent | rect. | 20 | 7 |
| 894 | 74.28 | wind | 9 | 14400 | < th | dose independent | rect. | 19 | 21 |
| 911 | 74.30 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 912 | 74.31 | wind | 9 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 917 | 74.32 | humidity | 70 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 927 | 74.34 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 952 | 74.38 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 9 | 18 |
| 971 | 74.40 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 996 | 74.44 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 17 | 10 |