Os06g0237800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0237800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Heat shock protein DnaJ family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.17 | 0.526 | 6.24 | -0.35 | 0.195 | 2.19 | -0.0525 | -1.75 | -0.274 | 4.38 | 20.87 | 1433 | -- | -- |
| 127.31 | 0.526 | 6.18 | 0.151 | 0.177 | 2.17 | -0.103 | -- | -0.138 | 4.5 | 20.01 | 1414 | -- | -- |
| 125.17 | 0.521 | 6.24 | -0.351 | 0.192 | 2.19 | -- | -1.76 | -0.274 | 4.38 | 20.87 | 1429 | -- | -- |
| 127.34 | 0.526 | 6.18 | 0.151 | 0.177 | 2.17 | -- | -- | -0.138 | 4.44 | 19.99 | 1415 | -- | -- |
| 126.62 | 0.524 | 6.24 | -0.323 | -- | 2.23 | -- | -1.68 | -0.268 | -- | 20.8 | 1378 | -- | -- |
| 272.99 | 0.775 | 6.06 | 0.957 | 0.34 | -- | 0.102 | -- | 0.373 | 3.47 | -- | -- | -- | -- |
| 273.02 | 0.774 | 6.06 | 0.955 | 0.34 | -- | -- | -- | 0.373 | 3.49 | -- | -- | -- | -- |
| 128.62 | 0.528 | 6.18 | 0.152 | -- | 2.21 | -- | -- | -0.138 | -- | 19.91 | 1360 | -- | -- |
| 127.85 | 0.527 | 6.18 | -- | 0.181 | 2.23 | -- | -- | -0.162 | 4.35 | 19.74 | 1423 | -- | -- |
| 279.5 | 0.781 | 6.06 | 0.97 | -- | -- | -- | -- | 0.382 | -- | -- | -- | -- | -- |
| 297.08 | 0.806 | 6.08 | -- | 0.359 | -- | -- | -- | 0.266 | 3.48 | -- | -- | -- | -- |
| 129.12 | 0.529 | 6.18 | -- | -- | 2.28 | -- | -- | -0.165 | -- | 19.61 | 1360 | -- | -- |
| 304.3 | 0.814 | 6.09 | -- | -- | -- | -- | -- | 0.274 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 17 | 123.73 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 87 | 125.80 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 94 | 125.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 96 | 125.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 529 | 128.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 539 | 128.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 547 | 128.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 742 | 129.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 749 | 129.97 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 777 | 130.09 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 807 | 130.22 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 813 | 130.25 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 815 | 130.26 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 825 | 130.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 826 | 130.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 868 | 130.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 891 | 130.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 922 | 130.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 9 |