FiT-DB / Search/ Help/ Sample detail

Os06g0237100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Putative thiol-disulphide oxidoreductase DCC family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.82 (0.0223) R2 : 0.24
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.688 (0.0574) R2dC : 0.239 R2C : 0.24
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0263 (0.0469) R2dN8 : 0.000677 R2N8 : 0.000789
σ : 0.42
deviance : 80.66
__
_____
C
peak time of C : 16.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.91 0.381 6.76 0.605 0.974 -1.02 -0.093 1.14 0.209 17 16.59 439 -- --
66.7 0.38 6.79 0.404 0.964 -1.01 0.185 -- 0.151 17 16.1 465 -- --
65.93 0.378 6.76 0.593 0.974 -1.01 -- 1.1 0.206 17 16.8 439 -- --
66.76 0.381 6.79 0.401 0.96 -1.01 -- -- 0.151 17 16.03 474 -- --
88.19 0.437 6.75 0.59 -- -1 -- 0.698 0.192 -- 12.08 1213 -- --
79.97 0.419 6.82 0.162 0.69 -- 0.0297 -- -0.00843 16.4 -- -- -- --
79.97 0.419 6.82 0.162 0.691 -- -- -- -0.00827 16.4 -- -- -- --
88.6 0.438 6.77 0.437 -- -0.967 -- -- 0.152 -- 15.4 1207 -- --
70.55 0.391 6.8 -- 0.904 -0.815 -- -- 0.0914 17 16.62 472 -- --
105.54 0.48 6.81 0.135 -- -- -- -- -0.0265 -- -- -- -- --
80.66 0.42 6.82 -- 0.688 -- -- -- -0.0263 16.4 -- -- -- --
92.97 0.449 6.79 -- -- -0.748 -- -- 0.0708 -- 16.3 1200 -- --
106.02 0.481 6.81 -- -- -- -- -- -0.0415 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.02 temperature 10 270 > th dose dependent rect. 1 17
4 62.68 temperature 10 270 > th dose dependent rect. 23 20
21 63.67 temperature 10 270 > th dose dependent rect. 10 21
26 63.85 temperature 10 270 > th dose dependent rect. 11 19
45 64.58 temperature 10 10 > th dose dependent rect. 2 18
66 64.99 temperature 30 270 < th dose dependent rect. 6 19
77 65.11 humidity 90 14400 > th dose dependent rect. 22 1
80 65.16 temperature 10 270 > th dose dependent rect. 23 8
83 65.28 humidity 90 14400 > th dose dependent rect. 21 3
94 65.43 wind 9 43200 > th dose independent rect. 19 19
97 65.47 temperature 30 270 < th dose independent rect. 6 18
100 65.50 wind 9 43200 < th dose independent rect. 20 18
104 65.52 temperature 15 720 > th dose dependent rect. 17 18
125 65.64 temperature 30 270 < th dose independent rect. 17 8
127 65.65 wind 9 43200 > th dose independent rect. 17 21
130 65.69 humidity 70 270 > th dose independent rect. 17 8
132 65.69 wind 7 43200 > th dose dependent rect. 6 8
142 65.73 wind 7 43200 > th dose dependent rect. 20 18
146 65.76 wind 7 43200 > th dose dependent sin 5 NA
160 65.81 temperature 10 720 > th dose dependent rect. 17 20
162 65.82 wind 7 43200 > th dose dependent rect. 23 15
163 65.83 wind 9 43200 < th dose independent sin 6 NA
176 65.87 wind 9 43200 > th dose independent rect. 20 16
179 65.88 humidity 90 14400 < th dose independent rect. 21 2
203 65.94 wind 9 43200 > th dose independent sin 7 NA
204 65.94 wind 9 43200 < th dose independent rect. 22 16
211 65.97 wind 9 43200 < th dose independent rect. 4 10
222 66.00 temperature 15 720 > th dose dependent sin 10 NA
240 66.05 temperature 20 270 > th dose independent rect. 11 8
241 66.05 temperature 20 270 > th dose independent rect. 12 18
245 66.06 temperature 20 270 > th dose independent rect. 1 17
258 66.08 temperature 10 270 > th dose dependent rect. 10 9
267 66.10 wind 9 43200 > th dose independent rect. 1 14
274 66.12 wind 9 43200 > th dose independent rect. 4 11
335 66.25 humidity 80 270 > th dose independent rect. 24 6
339 66.25 atmosphere 1000 43200 < th dose dependent rect. 9 7
350 66.27 atmosphere 1000 43200 < th dose dependent rect. 11 4
358 66.28 humidity 80 14400 > th dose dependent rect. 17 12
392 66.32 wind 9 43200 > th dose dependent rect. 11 22
404 66.35 wind 9 43200 > th dose independent rect. 14 22
414 66.36 humidity 90 14400 < th dose independent rect. 20 4
415 66.36 atmosphere 1000 43200 < th dose dependent rect. 12 1
419 66.37 atmosphere 1000 43200 < th dose dependent rect. 14 1
431 66.38 wind 9 43200 > th dose dependent rect. 9 21
456 66.43 humidity 90 14400 < th dose independent rect. 18 7
457 66.43 humidity 90 14400 < th dose independent rect. 17 9
492 66.47 wind 9 43200 < th dose independent rect. 20 13
493 66.47 wind 9 43200 > th dose independent rect. 4 23
510 66.48 wind 9 43200 > th dose dependent rect. 9 16
514 66.49 wind 9 43200 > th dose independent rect. 4 20
531 66.50 wind 9 43200 > th dose independent rect. 22 23
545 66.51 wind 9 43200 > th dose independent rect. 2 22
551 66.51 temperature 10 720 > th dose dependent rect. 15 22
553 66.52 wind 9 43200 > th dose independent no NA NA
569 66.53 wind 9 43200 > th dose dependent sin 19 NA
575 66.54 wind 9 43200 < th dose independent rect. 13 22
589 66.55 wind 9 43200 > th dose independent rect. 20 13
594 66.55 wind 9 43200 > th dose dependent rect. 20 12
610 66.57 wind 9 43200 > th dose dependent rect. 9 12
666 66.64 radiation 10 270 < th dose dependent rect. 17 8
702 66.68 wind 9 43200 < th dose independent rect. 5 19
714 66.69 wind 9 43200 > th dose independent rect. 4 17
721 66.69 wind 9 43200 < th dose independent rect. 22 23
724 66.69 atmosphere 995 10 > th dose dependent rect. 9 17
731 66.70 temperature 20 10 > th dose independent rect. 2 18
732 66.70 wind 9 43200 > th dose independent rect. 1 20
736 66.70 wind 9 43200 < th dose independent rect. 2 22
737 66.70 wind 9 43200 > th dose dependent sin 12 NA
741 66.70 temperature 10 720 > th dose dependent rect. 17 23
750 66.71 wind 9 43200 < th dose independent rect. 5 22
774 66.73 wind 9 43200 > th dose independent rect. 9 3
796 66.75 wind 9 43200 < th dose independent no NA NA
801 66.75 wind 7 43200 > th dose dependent rect. 9 3
805 66.75 wind 9 43200 > th dose dependent rect. 3 20
809 66.75 wind 9 43200 > th dose dependent rect. 24 23
818 66.76 temperature 10 10 > th dose dependent rect. 4 16
827 66.76 wind 9 43200 > th dose dependent rect. 22 23
831 66.77 wind 9 43200 > th dose dependent no NA NA
848 66.78 humidity 90 14400 > th dose dependent sin 16 NA
869 66.80 humidity 90 14400 < th dose independent sin 15 NA
906 66.81 atmosphere 1015 90 < th dose dependent rect. 15 16
971 66.85 atmosphere 1000 43200 < th dose dependent rect. 9 1