Os06g0235200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os06g0235200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 243.15 | 0.733 | 3.61 | 1.22 | 0.14 | 0.961 | 0.438 | 2.99 | 0.24 | 9.92 | 0.1039 | 5453 | -- | -- |
| 248.89 | 0.735 | 3.65 | 1.2 | 0.204 | 1.23 | 0.519 | -- | 0.223 | 9.62 | 0.002931 | 2106 | -- | -- |
| 243.88 | 0.727 | 3.61 | 1.24 | 0.141 | 0.95 | -- | 3.03 | 0.237 | 9.87 | 0.000749 | 5480 | -- | -- |
| 250.29 | 0.737 | 3.65 | 1.23 | 0.182 | 1.22 | -- | -- | 0.223 | 9.98 | 0.1033 | 2104 | -- | -- |
| 245.02 | 0.729 | 3.61 | 1.24 | -- | 0.96 | -- | 3 | 0.241 | -- | 0.04836 | 5480 | -- | -- |
| 269.25 | 0.769 | 3.66 | 1.57 | 0.154 | -- | 0.486 | -- | 0.149 | 9.2 | -- | -- | -- | -- |
| 270.07 | 0.77 | 3.66 | 1.59 | 0.152 | -- | -- | -- | 0.149 | 9.6 | -- | -- | -- | -- |
| 252.29 | 0.74 | 3.65 | 1.24 | -- | 1.2 | -- | -- | 0.228 | -- | 0.4996 | 2104 | -- | -- |
| 284.41 | 0.785 | 3.66 | -- | 0.186 | 1.8 | -- | -- | 0.162 | 9.5 | 0.2624 | 2211 | -- | -- |
| 271.43 | 0.77 | 3.67 | 1.59 | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
| 336.95 | 0.859 | 3.7 | -- | 0.152 | -- | -- | -- | -0.028 | 8.81 | -- | -- | -- | -- |
| 286.33 | 0.788 | 3.66 | -- | -- | 1.81 | -- | -- | 0.149 | -- | 0.5 | 2221 | -- | -- |
| 338.26 | 0.858 | 3.71 | -- | -- | -- | -- | -- | -0.0269 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 238.73 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 2 | 238.78 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 6 | 238.84 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 12 | 239.35 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 13 | 239.65 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 13 | 2 |
| 14 | 239.71 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 11 | 4 |
| 16 | 239.73 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 9 | 7 |
| 21 | 239.79 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 25 | 239.90 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 28 | 239.93 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 37 | 240.07 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 53 | 240.14 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 16 | 17 |
| 65 | 240.29 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 87 | 240.34 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 100 | 240.48 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 7 |
| 101 | 240.48 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 122 | 240.54 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 251 | 241.10 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 23 | NA |
| 297 | 241.38 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 309 | 241.42 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 16 | 17 |
| 355 | 241.61 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 384 | 241.66 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 8 | 11 |
| 386 | 241.68 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 9 | 3 |
| 417 | 241.84 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 479 | 241.95 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 8 | 7 |
| 499 | 242.04 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 500 | 242.04 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 525 | 242.12 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 18 |
| 530 | 242.12 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 531 | 242.12 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 18 |
| 539 | 242.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 18 |
| 558 | 242.23 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 563 | 242.25 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 9 |
| 565 | 242.25 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 9 |
| 573 | 242.29 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 12 |
| 577 | 242.29 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 12 |
| 579 | 242.30 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 12 |
| 607 | 242.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 9 |
| 647 | 242.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 14 |
| 648 | 242.47 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 14 |
| 651 | 242.47 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 14 |
| 733 | 242.63 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 22 | NA |
| 738 | 242.64 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 744 | 242.64 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 6 |
| 756 | 242.67 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 760 | 242.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 6 |
| 862 | 242.93 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 19 | NA |
| 863 | 242.93 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 19 | NA |
| 864 | 242.93 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 19 | NA |