Os06g0234800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os06g0234800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.88 | 0.711 | 3.15 | 1 | 0.511 | 3.12 | 1.23 | 3.16 | 0.229 | 13.3 | 19.9 | 4031 | -- | -- |
| 233.31 | 0.711 | 3.05 | 1.18 | 0.48 | 1.98 | 0.881 | -- | 0.331 | 12.7 | 21.55 | 3837 | -- | -- |
| 234.76 | 0.714 | 3.15 | 1.02 | 0.509 | 3.1 | -- | 3.22 | 0.23 | 12.8 | 19.98 | 4039 | -- | -- |
| 238.35 | 0.719 | 3.05 | 1.17 | 0.528 | 2.21 | -- | -- | 0.282 | 12.3 | 20.51 | 3191 | -- | -- |
| 250.79 | 0.738 | 3.16 | 1.04 | -- | 3.21 | -- | 3.29 | 0.24 | -- | 20.03 | 3919 | -- | -- |
| 276.15 | 0.779 | 3.15 | 0.164 | 0.579 | -- | 1.16 | -- | -0.084 | 13.4 | -- | -- | -- | -- |
| 281.5 | 0.786 | 3.14 | 0.202 | 0.577 | -- | -- | -- | -0.0784 | 13.1 | -- | -- | -- | -- |
| 254.31 | 0.743 | 3.06 | 1.13 | -- | 1.94 | -- | -- | 0.316 | -- | 21.8 | 3825 | -- | -- |
| 254.79 | 0.743 | 3.1 | -- | 0.427 | 1.12 | -- | -- | 0.131 | 12.7 | 24.8 | 2448 | -- | -- |
| 302.22 | 0.812 | 3.15 | 0.18 | -- | -- | -- | -- | -0.0897 | -- | -- | -- | -- | -- |
| 282.58 | 0.786 | 3.15 | -- | 0.574 | -- | -- | -- | -0.101 | 13 | -- | -- | -- | -- |
| 265.32 | 0.759 | 3.11 | -- | -- | 1.42 | -- | -- | 0.0842 | -- | 43.4 | 1023 | -- | -- |
| 303.08 | 0.813 | 3.16 | -- | -- | -- | -- | -- | -0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 227.60 | wind | 5 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 3 | 227.97 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 4 | 228.01 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 5 | 228.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 6 | 228.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 15 |
| 7 | 228.17 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 23 | 228.76 | wind | 3 | 43200 | > th | dose dependent | rect. | 21 | 4 |
| 26 | 228.85 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 15 |
| 40 | 229.23 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 49 | 229.48 | temperature | 20 | 4320 | < th | dose dependent | sin | 1 | NA |
| 78 | 229.80 | temperature | 20 | 4320 | < th | dose dependent | rect. | 9 | 18 |
| 84 | 229.82 | temperature | 20 | 4320 | < th | dose dependent | rect. | 9 | 21 |
| 99 | 229.98 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 101 | 229.99 | temperature | 20 | 1440 | > th | dose independent | sin | 1 | NA |
| 114 | 230.05 | temperature | 20 | 1440 | < th | dose independent | sin | 1 | NA |
| 119 | 230.06 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 22 |
| 173 | 230.42 | wind | 3 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 181 | 230.46 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 206 | 230.61 | temperature | 20 | 4320 | < th | dose dependent | rect. | 13 | 23 |
| 220 | 230.69 | temperature | 20 | 4320 | < th | dose dependent | rect. | 16 | 23 |
| 255 | 230.93 | wind | 5 | 43200 | > th | dose independent | sin | 10 | NA |
| 266 | 231.00 | temperature | 20 | 4320 | < th | dose dependent | sin | 16 | NA |
| 309 | 231.17 | wind | 5 | 43200 | < th | dose independent | sin | 10 | NA |
| 419 | 231.86 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 421 | 231.87 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 425 | 231.89 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 462 | 232.06 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 498 | 232.29 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 500 | 232.30 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 587 | 232.75 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 639 | 233.01 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 666 | 233.10 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 675 | 233.15 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 704 | 233.24 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 748 | 233.43 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 752 | 233.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 762 | 233.47 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 764 | 233.48 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 765 | 233.48 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 786 | 233.55 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 789 | 233.55 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 799 | 233.57 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 818 | 233.62 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 867 | 233.74 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 881 | 233.76 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 924 | 233.86 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 933 | 233.88 | wind | 5 | 43200 | > th | dose dependent | sin | 10 | NA |
| 992 | 234.04 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 3 |