Os06g0234700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0234700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.47 | 0.31 | 12.9 | -0.176 | 1.24 | 0.839 | -0.00403 | -3.56 | 0.0821 | 20.9 | 25.43 | 793 | -- | -- |
| 47.34 | 0.32 | 12.9 | 0.406 | 1.39 | 0.436 | -0.147 | -- | 0.183 | 20.7 | 25.03 | 2139 | -- | -- |
| 43.19 | 0.306 | 12.9 | -0.287 | 1.26 | 0.915 | -- | -4.48 | 0.102 | 20.9 | 26.4 | 844 | -- | -- |
| 47.03 | 0.319 | 12.8 | 0.465 | 1.33 | 0.496 | -- | -- | 0.204 | 20.6 | 24.62 | 864 | -- | -- |
| 104.58 | 0.476 | 12.9 | -0.699 | -- | 1.9 | -- | -5.42 | -0.115 | -- | 24.5 | 712 | -- | -- |
| 51.87 | 0.338 | 12.8 | 0.53 | 1.46 | -- | -0.239 | -- | 0.257 | 20.8 | -- | -- | -- | -- |
| 52.06 | 0.338 | 12.8 | 0.538 | 1.46 | -- | -- | -- | 0.257 | 20.8 | -- | -- | -- | -- |
| 114.89 | 0.499 | 12.8 | 0.24 | -- | 1.44 | -- | -- | 0.103 | -- | 24.33 | 685 | -- | -- |
| 51.2 | 0.333 | 12.8 | -- | 1.28 | 0.59 | -- | -- | 0.151 | 20.8 | 24.44 | 862 | -- | -- |
| 173.62 | 0.616 | 12.8 | 0.537 | -- | -- | -- | -- | 0.246 | -- | -- | -- | -- | -- |
| 59.7 | 0.361 | 12.8 | -- | 1.46 | -- | -- | -- | 0.197 | 20.8 | -- | -- | -- | -- |
| 116.23 | 0.502 | 12.8 | -- | -- | 1.48 | -- | -- | 0.0738 | -- | 24.3 | 687 | -- | -- |
| 181.23 | 0.628 | 12.8 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 7 | 37.55 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 8 |
| 13 | 38.07 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 37 | 38.84 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 64 | 39.20 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 67 | 39.22 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 7 |
| 75 | 39.33 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 9 |
| 89 | 39.48 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 167 | 40.10 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 183 | 40.20 | temperature | 20.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 188 | 40.24 | temperature | 20.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 198 | 40.35 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 8 |
| 200 | 40.36 | humidity | 90.0 | 270 | < th | dose independent | rect. | 14 | 5 |
| 208 | 40.38 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 255 | 40.72 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 267 | 40.76 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 277 | 40.80 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 282 | 40.81 | temperature | 30.0 | 90 | < th | dose dependent | sin | 15 | NA |
| 299 | 40.88 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 367 | 41.19 | temperature | 25.0 | 10 | < th | dose independent | rect. | 18 | 8 |
| 371 | 41.20 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 384 | 41.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 400 | 41.29 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 415 | 41.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 425 | 41.36 | radiation | 20.0 | 30 | < th | dose independent | rect. | 24 | 23 |
| 444 | 41.40 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 445 | 41.41 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 455 | 41.43 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 456 | 41.43 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 458 | 41.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 460 | 41.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 461 | 41.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 462 | 41.44 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 467 | 41.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 469 | 41.44 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 476 | 41.45 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 480 | 41.46 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 16 |
| 481 | 41.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 18 |
| 484 | 41.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 496 | 41.50 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 497 | 41.50 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 502 | 41.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 504 | 41.52 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 507 | 41.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 508 | 41.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 519 | 41.53 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 524 | 41.54 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 560 | 41.61 | radiation | 20.0 | 30 | < th | dose independent | rect. | 3 | 17 |
| 571 | 41.62 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 572 | 41.63 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 583 | 41.63 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 618 | 41.66 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 624 | 41.67 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 5 |
| 648 | 41.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 6 |
| 652 | 41.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 659 | 41.71 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 3 |
| 671 | 41.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 19 |
| 675 | 41.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 676 | 41.75 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 691 | 41.78 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 710 | 41.81 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 5 |
| 717 | 41.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 722 | 41.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 752 | 41.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 760 | 41.87 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 9 |
| 789 | 41.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 5 |
| 790 | 41.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 792 | 41.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 794 | 41.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 796 | 41.92 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 797 | 41.92 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 800 | 41.92 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 804 | 41.93 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 805 | 41.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 18 |
| 807 | 41.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 903 | 42.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 950 | 42.10 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 955 | 42.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 957 | 42.11 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 958 | 42.11 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 960 | 42.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 963 | 42.11 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 981 | 42.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 988 | 42.12 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 997 | 42.14 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 8 |