Os06g0233000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0233000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 255.27 | 0.751 | 7.12 | -0.412 | 1.34 | -0.556 | -0.577 | -0.866 | -0.143 | 15.5 | 1006 | 223 | -- | -- |
| 259.33 | 0.75 | 7.12 | -0.404 | 1.36 | -0.575 | -0.588 | -- | -0.112 | 15.5 | 1006 | 222 | -- | -- |
| 256.29 | 0.746 | 7.13 | -0.422 | 1.34 | -0.548 | -- | -0.869 | -0.149 | 15.5 | 1006 | 222 | -- | -- |
| 260.39 | 0.752 | 7.13 | -0.413 | 1.36 | -0.567 | -- | -- | -0.118 | 15.6 | 1006 | 222 | -- | -- |
| 354.19 | 0.877 | 7.11 | -0.498 | -- | -0.697 | -- | -1.14 | -0.126 | -- | 1006 | 218 | -- | -- |
| 285.08 | 0.792 | 7.18 | -0.393 | 1.47 | -- | -0.38 | -- | -0.36 | 15.8 | -- | -- | -- | -- |
| 285.51 | 0.791 | 7.19 | -0.398 | 1.47 | -- | -- | -- | -0.362 | 15.8 | -- | -- | -- | -- |
| 360.76 | 0.885 | 7.11 | -0.478 | -- | -0.73 | -- | -- | -0.0838 | -- | 1006 | 211 | -- | -- |
| 264.92 | 0.758 | 7.12 | -- | 1.36 | -0.558 | -- | -- | -0.0819 | 15.6 | 1006 | 222 | -- | -- |
| 404.85 | 0.94 | 7.18 | -0.459 | -- | -- | -- | -- | -0.401 | -- | -- | -- | -- | -- |
| 289.69 | 0.796 | 7.18 | -- | 1.48 | -- | -- | -- | -0.318 | 15.8 | -- | -- | -- | -- |
| 366.64 | 0.892 | 7.1 | -- | -- | -0.73 | -- | -- | -0.0321 | -- | 1006 | 193 | -- | -- |
| 410.42 | 0.946 | 7.17 | -- | -- | -- | -- | -- | -0.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 252.83 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 2 | 252.83 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 4 |
| 3 | 252.95 | wind | 1.0 | 1440 | < th | dose independent | rect. | 10 | 9 |
| 4 | 253.01 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 5 | 253.18 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 9 | 253.44 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 10 | 253.51 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 13 | 253.70 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 14 | 253.70 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 15 | 253.74 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 19 | 253.82 | wind | 1.0 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 24 | 254.11 | wind | 1.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 28 | 254.25 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 29 | 254.28 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 58 | 255.31 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 79 | 255.62 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 81 | 255.62 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 84 | 255.69 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 85 | 255.70 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 86 | 255.70 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 87 | 255.70 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 113 | 256.46 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 120 | 256.72 | wind | 1.0 | 720 | > th | dose independent | rect. | 10 | 16 |
| 150 | 257.28 | wind | 1.0 | 1440 | < th | dose independent | rect. | 10 | 16 |
| 161 | 257.43 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 171 | 257.63 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 181 | 257.79 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 14 |
| 185 | 257.93 | wind | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 197 | 258.03 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 270 | 259.21 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 277 | 259.29 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 4 |
| 278 | 259.29 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 284 | 259.36 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 297 | 259.48 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 298 | 259.48 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 313 | 259.62 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 322 | 259.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 346 | 259.83 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 354 | 259.99 | wind | 1.0 | 1440 | < th | dose independent | sin | 20 | NA |
| 356 | 260.01 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 360 | 260.05 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 369 | 260.14 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 7 |
| 398 | 260.35 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 10 |
| 399 | 260.35 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 10 |
| 415 | 260.48 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 417 | 260.48 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 421 | 260.51 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 14 |
| 423 | 260.52 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 450 | 260.57 | wind | 1.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 451 | 260.57 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 14 |
| 472 | 260.68 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 479 | 260.74 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 11 |
| 531 | 261.08 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 537 | 261.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 542 | 261.14 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 9 | 6 |
| 552 | 261.19 | wind | 1.0 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 570 | 261.33 | wind | 1.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 588 | 261.46 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 595 | 261.52 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 599 | 261.54 | radiation | 10.0 | 30 | > th | dose independent | rect. | 9 | 7 |
| 603 | 261.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 606 | 261.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 609 | 261.59 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 19 | 23 |
| 615 | 261.63 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 9 | 6 |
| 618 | 261.64 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 621 | 261.65 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 623 | 261.65 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 628 | 261.68 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 23 |
| 633 | 261.71 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 13 |
| 657 | 261.84 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 691 | 261.98 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 701 | 262.00 | atmosphere | 1005.0 | 270 | > th | dose independent | no | NA | NA |
| 712 | 262.06 | wind | 5.0 | 4320 | < th | dose independent | rect. | 9 | 6 |
| 722 | 262.09 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 754 | 262.22 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 763 | 262.23 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 2 | 21 |
| 783 | 262.30 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 800 | 262.36 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 18 |
| 821 | 262.43 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 822 | 262.43 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 5 |
| 823 | 262.44 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 835 | 262.48 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 848 | 262.53 | temperature | 25.0 | 10 | > th | dose independent | rect. | 2 | 7 |
| 854 | 262.56 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 863 | 262.57 | wind | 7.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 875 | 262.61 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 911 | 262.74 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 915 | 262.74 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 916 | 262.75 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 974 | 262.96 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 997 | 263.04 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |