Os06g0230000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0230000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 248.15 | 0.74 | 3.08 | 0.167 | 0.341 | 3.59 | -0.541 | 7.39 | -0.0777 | 9.23 | 10.1 | 631 | -- | -- |
| 252.93 | 0.741 | 3 | 0.106 | 0.36 | 2.43 | -0.467 | -- | 0.0306 | 8.75 | 10.2 | 618 | -- | -- |
| 247.8 | 0.733 | 3.08 | 0.216 | 0.305 | 3.71 | -- | 7.94 | -0.0727 | 9.74 | 10 | 811 | -- | -- |
| 251.03 | 0.738 | 3.05 | 0.0352 | 0.327 | 2.15 | -- | -- | -0.076 | 8.7 | 10.4 | 628 | -- | -- |
| 253.93 | 0.742 | 3.1 | 0.201 | -- | 3.39 | -- | 7.64 | -0.0752 | -- | 9.998 | 811 | -- | -- |
| 268.6 | 0.768 | 3.07 | -0.0747 | 0.255 | -- | -0.381 | -- | -0.134 | 9.21 | -- | -- | -- | -- |
| 269.11 | 0.768 | 3.07 | -0.0887 | 0.258 | -- | -- | -- | -0.134 | 9.04 | -- | -- | -- | -- |
| 257.01 | 0.747 | 3.06 | 0.0394 | -- | 1.92 | -- | -- | -0.077 | -- | 10.33 | 618 | -- | -- |
| 251.04 | 0.738 | 3.05 | -- | 0.327 | 2.05 | -- | -- | -0.081 | 8.87 | 10.37 | 619 | -- | -- |
| 272.93 | 0.772 | 3.07 | -0.0892 | -- | -- | -- | -- | -0.133 | -- | -- | -- | -- | -- |
| 269.31 | 0.768 | 3.06 | -- | 0.258 | -- | -- | -- | -0.124 | 9.06 | -- | -- | -- | -- |
| 257.05 | 0.747 | 3.06 | -- | -- | 1.91 | -- | -- | -0.0817 | -- | 10.36 | 625 | -- | -- |
| 273.14 | 0.771 | 3.07 | -- | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 243.36 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 2 | 243.54 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 3 | 243.81 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 5 | 243.93 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 6 | 243.94 | humidity | 60 | 10 | < th | dose independent | rect. | 17 | 18 |
| 13 | 244.12 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 39 | 244.12 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 84 | 244.16 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 104 | 244.24 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 116 | 244.36 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 176 | 244.37 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 274 | 244.58 | humidity | 60 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 279 | 245.21 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 297 | 245.38 | humidity | 60 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 299 | 245.55 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 314 | 245.57 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 359 | 246.13 | radiation | 40 | 10 | > th | dose dependent | sin | 11 | NA |
| 440 | 247.16 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 4 |
| 446 | 247.26 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 8 |
| 456 | 247.43 | wind | 7 | 90 | > th | dose dependent | rect. | 18 | 8 |
| 463 | 247.74 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 10 |
| 482 | 248.10 | wind | 7 | 90 | > th | dose dependent | rect. | 18 | 11 |
| 495 | 248.28 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 503 | 248.41 | wind | 9 | 720 | > th | dose independent | rect. | 19 | 1 |
| 504 | 248.41 | wind | 9 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 505 | 248.44 | wind | 7 | 90 | > th | dose independent | rect. | 19 | 7 |
| 510 | 248.50 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 533 | 248.71 | wind | 7 | 90 | > th | dose independent | rect. | 19 | 10 |
| 613 | 249.25 | wind | 9 | 720 | > th | dose dependent | sin | 9 | NA |
| 641 | 249.44 | wind | 7 | 90 | > th | dose independent | rect. | 19 | 3 |
| 668 | 249.50 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 684 | 249.66 | wind | 1 | 10 | < th | dose dependent | sin | 22 | NA |
| 719 | 249.81 | wind | 9 | 720 | > th | dose independent | rect. | 17 | 19 |
| 752 | 250.22 | wind | 1 | 10 | < th | dose independent | sin | 22 | NA |
| 775 | 250.61 | wind | 7 | 90 | > th | dose independent | rect. | 20 | 1 |
| 783 | 250.70 | wind | 9 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 784 | 250.72 | wind | 9 | 720 | > th | dose independent | rect. | 17 | 22 |
| 785 | 250.72 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 796 | 250.74 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 12 |
| 814 | 250.79 | wind | 9 | 720 | > th | dose dependent | sin | 15 | NA |
| 860 | 251.05 | wind | 7 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 870 | 251.07 | wind | 9 | 720 | > th | dose independent | sin | 9 | NA |
| 874 | 251.08 | wind | 9 | 720 | > th | dose independent | rect. | 17 | 5 |
| 895 | 251.24 | wind | 9 | 720 | < th | dose independent | sin | 9 | NA |
| 915 | 251.31 | wind | 7 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 922 | 251.34 | wind | 9 | 720 | > th | dose dependent | no | NA | NA |
| 940 | 251.34 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 993 | 251.39 | wind | 9 | 720 | > th | dose dependent | rect. | 20 | 23 |