Os06g0229400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0229400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Lipolytic enzyme, G-D-S-L family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 171.48 | 0.615 | 3.57 | 0.697 | 0.208 | 0.243 | -0.912 | 4.91 | 0.233 | 4.87 | 1.002 | 20 | -- | -- |
| 179.68 | 0.624 | 3.59 | 0.694 | 0.101 | 0.814 | -0.99 | -- | 0.221 | 5.93 | 1.242 | 17 | -- | -- |
| 173.37 | 0.613 | 3.57 | 0.701 | 0.211 | 0.216 | -- | 4.6 | 0.236 | 3.7 | 1 | 20 | -- | -- |
| 180.34 | 0.625 | 3.59 | 0.607 | 0.161 | 0.787 | -- | -- | 0.225 | 3.71 | 1.2 | 17 | -- | -- |
| 175.36 | 0.617 | 3.57 | 0.695 | -- | 0.459 | -- | 3.84 | 0.246 | -- | 1.201 | 19 | -- | -- |
| 186.2 | 0.64 | 3.6 | 0.666 | 0.275 | -- | -0.404 | -- | 0.209 | 4.22 | -- | -- | -- | -- |
| 186.46 | 0.639 | 3.6 | 0.67 | 0.274 | -- | -- | -- | 0.211 | 3.42 | -- | -- | -- | -- |
| 181.49 | 0.627 | 3.59 | 0.609 | -- | 0.91 | -- | -- | 0.234 | -- | 1.224 | 17 | -- | -- |
| 190.04 | 0.642 | 3.61 | -- | 0.142 | 0.909 | -- | -- | 0.161 | 3.26 | 1.228 | 17 | -- | -- |
| 190.69 | 0.645 | 3.6 | 0.682 | -- | -- | -- | -- | 0.218 | -- | -- | -- | -- | -- |
| 198.29 | 0.659 | 3.61 | -- | 0.287 | -- | -- | -- | 0.137 | 3.41 | -- | -- | -- | -- |
| 190.28 | 0.642 | 3.6 | -- | -- | 0.76 | -- | -- | 0.184 | -- | 2.07 | 17 | -- | -- |
| 202.94 | 0.665 | 3.61 | -- | -- | -- | -- | -- | 0.143 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 166.05 | wind | 1.0 | 90 | < th | dose independent | rect. | 17 | 6 |
| 3 | 166.21 | wind | 1.0 | 90 | < th | dose independent | rect. | 20 | 3 |
| 7 | 167.45 | wind | 1.0 | 90 | < th | dose dependent | rect. | 21 | 2 |
| 8 | 167.74 | wind | 1.0 | 90 | < th | dose dependent | rect. | 17 | 6 |
| 13 | 168.43 | wind | 1.0 | 90 | < th | dose independent | rect. | 14 | 9 |
| 15 | 168.82 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 16 | 168.87 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 17 | 168.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 19 | 168.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 20 | 168.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 30 | 169.11 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 13 |
| 42 | 169.20 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 80 | 169.47 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 85 | 169.49 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 92 | 169.51 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 114 | 169.59 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 141 | 169.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 159 | 169.76 | atmosphere | 1010.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 161 | 169.76 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 182 | 169.81 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 9 |
| 190 | 169.83 | atmosphere | 1010.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 231 | 169.93 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 2 | 11 |
| 240 | 169.94 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 247 | 169.95 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 253 | 169.95 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 266 | 169.98 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 273 | 169.98 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 288 | 170.00 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 295 | 170.01 | wind | 1.0 | 90 | < th | dose dependent | rect. | 14 | 9 |
| 304 | 170.03 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 355 | 170.06 | humidity | 50.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 384 | 170.07 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 399 | 170.08 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 423 | 170.08 | wind | 1.0 | 30 | < th | dose dependent | sin | 16 | NA |
| 440 | 170.11 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 505 | 170.16 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 506 | 170.17 | wind | 1.0 | 30 | < th | dose independent | sin | 15 | NA |
| 529 | 170.19 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 563 | 170.21 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 673 | 170.28 | atmosphere | 1010.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 674 | 170.29 | atmosphere | 1010.0 | 14400 | < th | dose independent | no | NA | NA |
| 694 | 170.30 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 697 | 170.31 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 13 |
| 712 | 170.31 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 713 | 170.31 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 5 |
| 723 | 170.32 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 736 | 170.34 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 747 | 170.34 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 793 | 170.38 | humidity | 50.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 801 | 170.39 | atmosphere | 1010.0 | 14400 | > th | dose independent | no | NA | NA |
| 802 | 170.39 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 849 | 170.43 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 853 | 170.43 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 8 | 23 |