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Os06g0229200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, family 31 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.89 (0.0214) R2 : 0.572
β1 : 0.79 (0.0781) R2dD : 0.0998 R2D : 0.0215
β2 : 1.11 (0.052) R2dC : 0.429 R2C : 0.401
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.415 (0.0455) R2dN8 : 0.105 R2N8 : 0.0452
σ : 0.401
deviance : 73.36
__
_____
C
peak time of C : 9.75
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.89 0.384 9.91 0.841 1.01 -0.302 -0.737 -1.33 0.381 10.1 58.85 630 -- --
67.89 0.384 9.9 0.872 1 -0.457 -0.619 -- 0.37 10 56 637 -- --
68.77 0.386 9.91 0.825 1.02 -0.303 -- -1 0.375 10.1 58 631 -- --
69.4 0.388 9.9 0.863 1.01 -0.428 -- -- 0.386 10.1 55 629 -- --
110.16 0.489 9.86 1.07 -- -0.94 -- 0.857 0.506 -- 79.78 785 -- --
72.42 0.399 9.89 0.809 1.11 -- -0.497 -- 0.416 9.76 -- -- -- --
73.36 0.401 9.89 0.79 1.11 -- -- -- 0.415 9.75 -- -- -- --
108.51 0.485 9.91 0.829 -- -1.05 -- -- 0.458 -- 79 813 -- --
87.8 0.436 9.92 -- 1.04 -0.301 -- -- 0.295 9.9 56.07 628 -- --
146.46 0.565 9.92 0.78 -- -- -- -- 0.416 -- -- -- -- --
89.83 0.443 9.91 -- 1.11 -- -- -- 0.327 9.7 -- -- -- --
125.68 0.522 9.93 -- -- -0.985 -- -- 0.365 -- 81.9 779 -- --
162.5 0.595 9.94 -- -- -- -- -- 0.33 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.91 temperature 25.0 30 > th dose independent rect. 16 4
2 63.98 temperature 15.0 30 > th dose dependent rect. 16 4
3 64.02 radiation 1.0 270 > th dose dependent rect. 16 3
14 64.04 wind 9.0 14400 > th dose dependent rect. 16 2
23 64.53 radiation 20.0 270 > th dose independent rect. 16 1
38 64.58 humidity 90.0 30 < th dose independent rect. 16 4
39 64.58 wind 1.0 30 > th dose independent rect. 3 17
40 64.58 wind 9.0 14400 > th dose dependent rect. 16 5
43 64.69 temperature 20.0 270 > th dose dependent rect. 16 1
44 64.70 wind 1.0 14400 < th dose independent rect. 24 3
49 64.74 wind 9.0 14400 > th dose independent rect. 17 1
71 64.89 wind 9.0 14400 < th dose independent rect. 17 1
76 64.93 precipitation 0.1 30 < th dose independent rect. 16 4
77 64.93 precipitation 0.1 30 < th dose dependent rect. 16 4
79 64.95 wind 1.0 14400 > th dose independent rect. 24 3
80 64.95 humidity 70.0 270 < th dose independent rect. 16 3
81 64.95 humidity 50.0 10 > th dose independent rect. 16 4
84 64.97 wind 9.0 14400 < th dose independent rect. 17 4
85 64.97 radiation 10.0 10 < th dose independent rect. 16 4
87 64.99 humidity 70.0 270 < th dose independent rect. 15 5
103 65.05 radiation 40.0 10 < th dose dependent rect. 7 13
104 65.06 precipitation 0.1 43200 < th dose independent rect. 17 1
105 65.06 precipitation 0.1 43200 < th dose dependent rect. 17 1
111 65.09 radiation 30.0 30 < th dose independent rect. 3 17
112 65.10 humidity 70.0 270 < th dose independent rect. 17 15
114 65.12 humidity 50.0 270 > th dose independent rect. 17 23
115 65.12 atmosphere 1015.0 30 < th dose dependent rect. 16 4
116 65.13 wind 9.0 14400 > th dose independent rect. 17 4
118 65.14 temperature 20.0 720 > th dose dependent rect. 8 1
122 65.16 precipitation 0.1 43200 > th dose dependent rect. 17 1
123 65.17 temperature 30.0 270 > th dose independent rect. 17 2
137 65.18 wind 5.0 14400 > th dose dependent rect. 17 1
141 65.20 temperature 15.0 30 > th dose dependent rect. 20 7
147 65.23 precipitation 0.1 43200 > th dose independent rect. 17 1
148 65.23 wind 7.0 14400 < th dose independent rect. 19 2
149 65.23 radiation 10.0 10 < th dose independent rect. 14 6
162 65.26 wind 9.0 10 < th dose independent rect. 16 4
185 65.31 temperature 20.0 30 > th dose independent rect. 20 20
186 65.32 humidity 70.0 270 > th dose independent sin 13 NA
187 65.32 wind 7.0 14400 > th dose independent rect. 20 1
202 65.32 wind 5.0 14400 > th dose dependent rect. 19 2
203 65.32 wind 9.0 14400 > th dose dependent rect. 20 2
205 65.32 wind 1.0 14400 < th dose dependent rect. 24 4
220 65.36 wind 1.0 30 > th dose independent rect. 16 4
222 65.36 radiation 40.0 10 < th dose dependent rect. 16 4
232 65.39 radiation 30.0 30 < th dose independent rect. 1 19
251 65.43 temperature 10.0 10 > th dose independent rect. 16 4
253 65.43 atmosphere 1010.0 10 < th dose independent rect. 16 4
296 65.47 radiation 40.0 10 < th dose dependent rect. 16 19
306 65.49 temperature 10.0 10 > th dose dependent rect. 20 20
308 65.50 atmosphere 1015.0 10 < th dose independent rect. 20 20
311 65.52 temperature 10.0 1440 > th dose independent rect. 17 4
314 65.52 radiation 30.0 1440 < th dose independent rect. 17 4
322 65.52 temperature 10.0 1440 > th dose independent rect. 21 20
329 65.53 radiation 40.0 10 < th dose dependent rect. 3 17
333 65.55 wind 1.0 90 > th dose independent rect. 15 14
334 65.55 precipitation 0.1 30 < th dose independent rect. 20 20
339 65.55 precipitation 0.1 30 < th dose dependent rect. 20 20
348 65.58 radiation 40.0 10 < th dose dependent rect. 23 23
351 65.59 humidity 50.0 30 > th dose independent rect. 20 20
355 65.60 wind 9.0 10 < th dose independent rect. 20 20
358 65.61 atmosphere 995.0 10 > th dose independent rect. 16 4
371 65.65 humidity 90.0 270 < th dose dependent rect. 16 2
377 65.66 temperature 25.0 90 > th dose dependent rect. 17 14
399 65.72 atmosphere 995.0 10 > th dose independent rect. 20 20
421 65.77 temperature 25.0 90 > th dose dependent rect. 17 11
428 65.79 humidity 70.0 270 < th dose independent sin 13 NA
436 65.80 wind 9.0 14400 < th dose independent rect. 17 10
442 65.81 radiation 10.0 10 < th dose independent rect. 10 10
449 65.82 wind 1.0 14400 > th dose dependent rect. 20 1
467 65.85 radiation 30.0 30 < th dose independent rect. 7 13
473 65.86 radiation 40.0 10 < th dose dependent rect. 10 10
481 65.88 humidity 50.0 270 > th dose independent rect. 9 14
488 65.89 wind 3.0 270 > th dose independent rect. 15 2
490 65.89 wind 9.0 14400 < th dose dependent rect. 20 1
493 65.89 radiation 20.0 10 < th dose dependent rect. 14 6
529 65.92 radiation 40.0 10 < th dose dependent rect. 1 19
537 65.94 wind 1.0 720 > th dose independent rect. 19 4
547 65.95 atmosphere 1010.0 90 < th dose dependent rect. 18 1
553 65.95 temperature 10.0 90 > th dose dependent rect. 20 11
619 66.04 radiation 30.0 270 < th dose independent rect. 23 10
654 66.07 precipitation 0.1 270 < th dose independent rect. 16 1
656 66.07 temperature 20.0 90 > th dose independent rect. 20 7
659 66.07 precipitation 0.1 270 < th dose dependent rect. 16 1
664 66.07 radiation 30.0 10 < th dose dependent rect. 16 17
672 66.09 radiation 30.0 90 < th dose independent rect. 23 21
673 66.09 temperature 15.0 270 > th dose dependent rect. 20 3
697 66.11 humidity 80.0 43200 < th dose independent rect. 2 19
700 66.11 wind 9.0 30 < th dose dependent rect. 16 4
718 66.13 radiation 10.0 10 < th dose independent rect. 8 12
719 66.13 humidity 80.0 43200 > th dose independent rect. 4 18
721 66.13 atmosphere 1015.0 270 < th dose dependent rect. 16 1
724 66.14 humidity 70.0 43200 > th dose independent rect. 13 1
727 66.14 humidity 60.0 43200 > th dose dependent rect. 12 2
740 66.15 radiation 10.0 10 < th dose dependent rect. 3 17
754 66.17 humidity 80.0 43200 > th dose dependent rect. 21 1
768 66.18 atmosphere 995.0 270 > th dose independent rect. 17 22
774 66.19 atmosphere 1005.0 270 < th dose independent rect. 17 1
779 66.19 humidity 60.0 10 > th dose independent rect. 3 17
788 66.20 radiation 30.0 10 < th dose independent rect. 16 19
797 66.21 temperature 20.0 10 > th dose independent rect. 22 18
808 66.22 atmosphere 1015.0 14400 < th dose dependent rect. 6 1
815 66.23 atmosphere 995.0 14400 > th dose dependent rect. 6 1
838 66.25 radiation 1.0 14400 < th dose dependent rect. 23 1
842 66.26 wind 7.0 270 < th dose independent rect. 16 1
852 66.26 radiation 10.0 10 < th dose dependent rect. 10 10
854 66.26 radiation 10.0 10 < th dose dependent rect. 23 23
873 66.28 atmosphere 1015.0 14400 < th dose dependent rect. 4 1
889 66.28 humidity 70.0 43200 > th dose dependent rect. 3 19
908 66.29 humidity 80.0 43200 < th dose independent rect. 8 16
913 66.29 atmosphere 995.0 14400 > th dose dependent rect. 4 1
916 66.29 atmosphere 1010.0 10 < th dose dependent rect. 18 2
930 66.30 humidity 80.0 43200 > th dose independent rect. 8 16
957 66.31 atmosphere 1015.0 14400 < th dose dependent rect. 10 1
976 66.31 radiation 40.0 30 < th dose dependent rect. 23 21
981 66.32 atmosphere 995.0 14400 > th dose dependent rect. 10 1
983 66.32 precipitation 0.1 43200 > th dose dependent rect. 17 3