Os06g0224600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochodrial transcription termination factor-related family protein.
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Os06g0224600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochodrial transcription termination factor-related family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.03 | 0.502 | 9.41 | -0.251 | 0.313 | 0.547 | 0.227 | 1.92 | -0.569 | 15.1 | 78.98 | 2680 | -- | -- |
| 117.97 | 0.506 | 9.43 | -0.414 | 0.308 | 0.721 | 0.0945 | -- | -0.584 | 15.4 | 79.16 | 2723 | -- | -- |
| 114.18 | 0.498 | 9.41 | -0.256 | 0.313 | 0.544 | -- | 1.86 | -0.569 | 15.3 | 78.7 | 2690 | -- | -- |
| 118 | 0.506 | 9.43 | -0.411 | 0.308 | 0.719 | -- | -- | -0.583 | 15.4 | 79.13 | 2724 | -- | -- |
| 117.18 | 0.504 | 9.42 | -0.286 | -- | 0.602 | -- | 1.49 | -0.579 | -- | 84.2 | 1829 | -- | -- |
| 130.79 | 0.536 | 9.44 | -0.323 | 0.236 | -- | -0.0699 | -- | -0.627 | 16.1 | -- | -- | -- | -- |
| 130.8 | 0.536 | 9.44 | -0.324 | 0.235 | -- | -- | -- | -0.627 | 16.1 | -- | -- | -- | -- |
| 119.68 | 0.51 | 9.44 | -0.418 | -- | 0.746 | -- | -- | -0.612 | -- | 83.95 | 1823 | -- | -- |
| 119.24 | 0.509 | 9.46 | -- | 0.188 | 0.934 | -- | -- | -0.705 | 15.9 | 76.03 | 7714 | -- | -- |
| 133.81 | 0.541 | 9.44 | -0.334 | -- | -- | -- | -- | -0.633 | -- | -- | -- | -- | -- |
| 133.57 | 0.541 | 9.43 | -- | 0.242 | -- | -- | -- | -0.591 | 16 | -- | -- | -- | -- |
| 118.83 | 0.508 | 9.46 | -- | -- | 0.98 | -- | -- | -0.738 | -- | 74.07 | 16179 | -- | -- |
| 136.75 | 0.546 | 9.43 | -- | -- | -- | -- | -- | -0.596 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.22 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 7 | 104.83 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 14 | 105.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 15 | 105.55 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 17 | 105.59 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 21 | 105.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 22 | 105.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 26 | 105.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 27 | 105.83 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 32 | 105.95 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 39 | 106.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 40 | 106.13 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 49 | 106.29 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 6 |
| 50 | 106.37 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 53 | 106.42 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 62 | 106.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 63 | 106.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 64 | 106.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 65 | 106.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 67 | 106.54 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 71 | 106.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 75 | 106.64 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 77 | 106.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 89 | 106.78 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 98 | 106.87 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 102 | 106.89 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 106 | 106.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 117 | 107.00 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 120 | 107.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 123 | 107.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 124 | 107.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 135 | 107.13 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 143 | 107.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 144 | 107.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 146 | 107.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 169 | 107.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 171 | 107.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 175 | 107.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 178 | 107.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 181 | 107.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 193 | 107.50 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 195 | 107.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 196 | 107.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 5 |
| 205 | 107.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 230 | 107.70 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 231 | 107.70 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 244 | 107.77 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 246 | 107.77 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 247 | 107.78 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 256 | 107.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 10 |
| 268 | 107.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 322 | 108.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 324 | 108.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 333 | 108.30 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 342 | 108.34 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 360 | 108.41 | wind | 1.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 362 | 108.42 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 377 | 108.47 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 378 | 108.47 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 385 | 108.49 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 390 | 108.51 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 428 | 108.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 439 | 108.70 | wind | 1.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 440 | 108.70 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 441 | 108.70 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 455 | 108.76 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 456 | 108.76 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 459 | 108.77 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 464 | 108.79 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 470 | 108.82 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 485 | 108.87 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 13 |
| 494 | 108.89 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 497 | 108.90 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 15 |
| 509 | 108.93 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 545 | 109.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 550 | 109.08 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 553 | 109.08 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 556 | 109.09 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 557 | 109.09 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 559 | 109.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 562 | 109.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 568 | 109.12 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 10 |
| 580 | 109.16 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 605 | 109.22 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 606 | 109.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 9 |
| 611 | 109.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 9 |
| 612 | 109.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 617 | 109.24 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 640 | 109.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 649 | 109.31 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 673 | 109.40 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 693 | 109.43 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 744 | 109.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 748 | 109.57 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 803 | 109.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 810 | 109.71 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 821 | 109.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 824 | 109.74 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 826 | 109.74 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 850 | 109.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 862 | 109.81 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 882 | 109.86 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 885 | 109.86 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 913 | 109.92 | wind | 3.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 923 | 109.95 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 924 | 109.95 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 927 | 109.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 931 | 109.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 939 | 109.99 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 955 | 110.02 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 966 | 110.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |