Os06g0222800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Metallophosphoesterase domain containing protein.
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Os06g0222800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Metallophosphoesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.63 | 0.553 | 3.29 | -0.163 | 0.314 | 0.248 | 0.225 | -2.46 | 0.144 | 12.5 | 84.96 | 4174 | -- | -- |
| 144.89 | 0.565 | 3.28 | -0.0492 | 0.215 | 0.272 | 0.219 | -- | 0.216 | 11.7 | 84.96 | 4174 | -- | -- |
| 138.77 | 0.549 | 3.29 | -0.156 | 0.318 | 0.251 | -- | -2.48 | 0.145 | 12.3 | 84.83 | 4131 | -- | -- |
| 145.04 | 0.565 | 3.28 | -0.0428 | 0.204 | 0.309 | -- | -- | 0.218 | 11 | 84.83 | 4131 | -- | -- |
| 144.94 | 0.561 | 3.3 | -0.164 | -- | 0.226 | -- | -2.56 | 0.145 | -- | 84.59 | 4256 | -- | -- |
| 145.87 | 0.566 | 3.29 | -0.0411 | 0.323 | -- | 0.316 | -- | 0.207 | 12.6 | -- | -- | -- | -- |
| 146.27 | 0.566 | 3.28 | -0.0297 | 0.322 | -- | -- | -- | 0.208 | 12.3 | -- | -- | -- | -- |
| 146.95 | 0.567 | 3.29 | -0.0512 | -- | 0.47 | -- | -- | 0.223 | -- | 84.59 | 4256 | -- | -- |
| 145.09 | 0.564 | 3.28 | -- | 0.205 | 0.305 | -- | -- | 0.222 | 11 | 84.83 | 4131 | -- | -- |
| 152.79 | 0.578 | 3.29 | -0.0404 | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
| 146.3 | 0.566 | 3.28 | -- | 0.322 | -- | -- | -- | 0.212 | 12.3 | -- | -- | -- | -- |
| 147.01 | 0.567 | 3.28 | -- | -- | 0.469 | -- | -- | 0.229 | -- | 84.59 | 4256 | -- | -- |
| 152.83 | 0.577 | 3.29 | -- | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.14 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 11 | 130.14 | radiation | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 21 | 130.78 | radiation | 1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 23 | 134.28 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 45 | 135.90 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 47 | 136.16 | temperature | 20 | 30 | > th | dose independent | rect. | 5 | 1 |
| 48 | 136.64 | temperature | 20 | 30 | > th | dose independent | rect. | 5 | 13 |
| 50 | 136.86 | humidity | 60 | 720 | > th | dose dependent | rect. | 9 | 1 |
| 51 | 136.88 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 52 | 136.90 | humidity | 60 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 55 | 137.04 | humidity | 90 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 57 | 137.18 | radiation | 1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 62 | 137.36 | humidity | 80 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 63 | 137.39 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 17 |
| 77 | 137.55 | humidity | 80 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 81 | 137.59 | temperature | 10 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 100 | 137.73 | humidity | 90 | 4320 | < th | dose dependent | rect. | 21 | 15 |
| 102 | 137.75 | humidity | 50 | 4320 | > th | dose dependent | rect. | 2 | 10 |
| 123 | 137.83 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 124 | 137.84 | humidity | 80 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 129 | 137.85 | humidity | 70 | 720 | > th | dose independent | rect. | 9 | 1 |
| 133 | 137.87 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 1 |
| 147 | 137.90 | humidity | 90 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 207 | 138.05 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 5 |
| 229 | 138.10 | humidity | 90 | 4320 | < th | dose dependent | sin | 6 | NA |
| 250 | 138.15 | humidity | 90 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 256 | 138.17 | temperature | 30 | 90 | < th | dose independent | rect. | 6 | 23 |
| 299 | 138.24 | humidity | 80 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 302 | 138.24 | humidity | 50 | 4320 | > th | dose dependent | sin | 5 | NA |
| 325 | 138.28 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 5 | 1 |
| 439 | 138.46 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 4 |
| 495 | 138.52 | humidity | 70 | 4320 | < th | dose independent | sin | 6 | NA |
| 515 | 138.55 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 17 |
| 530 | 138.57 | humidity | 80 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 585 | 138.62 | humidity | 70 | 4320 | > th | dose independent | sin | 7 | NA |
| 599 | 138.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 619 | 138.66 | wind | 5 | 1440 | > th | dose independent | rect. | 17 | 18 |
| 682 | 138.71 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 6 |
| 741 | 138.76 | wind | 5 | 1440 | < th | dose independent | rect. | 17 | 18 |
| 752 | 138.77 | humidity | 80 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 798 | 138.81 | radiation | 10 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 802 | 138.81 | humidity | 70 | 30 | > th | dose independent | rect. | 9 | 20 |
| 816 | 138.82 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 8 |
| 833 | 138.83 | humidity | 70 | 4320 | < th | dose independent | rect. | 6 | 10 |
| 842 | 138.83 | humidity | 80 | 4320 | > th | dose independent | rect. | 7 | 19 |
| 855 | 138.84 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 868 | 138.84 | humidity | 80 | 4320 | > th | dose independent | rect. | 7 | 17 |
| 870 | 138.84 | humidity | 80 | 4320 | > th | dose independent | rect. | 7 | 21 |
| 901 | 138.86 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 930 | 138.87 | humidity | 80 | 4320 | < th | dose dependent | rect. | 15 | 21 |
| 933 | 138.88 | wind | 5 | 1440 | > th | dose independent | rect. | 17 | 8 |
| 934 | 138.88 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 12 |
| 937 | 138.88 | humidity | 50 | 10 | > th | dose independent | rect. | 6 | 23 |
| 949 | 138.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 956 | 138.89 | humidity | 90 | 4320 | < th | dose dependent | rect. | 7 | 19 |