Os06g0221000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to P-type R2R3 Myb protein (Fragment).
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Os06g0221000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to P-type R2R3 Myb protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.03 | 0.27 | 3.08 | -0.115 | 0.14 | 8.62 | 0.0127 | -32.2 | -0.0598 | 10.3 | 1.5 | 230 | -- | -- |
| 54.32 | 0.343 | 3.08 | -0.0316 | 0.377 | 2.01 | 0.101 | -- | -0.249 | 16.3 | 2.5 | 36 | -- | -- |
| 32.99 | 0.268 | 3.1 | -0.169 | 0.144 | 8.86 | -- | -33 | -0.0539 | 10.6 | 1.376 | 274 | -- | -- |
| 38.64 | 0.29 | 3.04 | 0.147 | 0.129 | -0.334 | -- | -- | -0.0417 | 12.8 | 2.5 | 57 | -- | -- |
| 34.15 | 0.272 | 3.11 | -0.175 | -- | 8.42 | -- | -31.5 | -0.0622 | -- | 1.297 | 257 | -- | -- |
| 38.45 | 0.291 | 3.04 | 0.11 | 0.125 | -- | -0.0321 | -- | -0.0651 | 11 | -- | -- | -- | -- |
| 38.46 | 0.29 | 3.04 | 0.109 | 0.125 | -- | -- | -- | -0.0652 | 11.1 | -- | -- | -- | -- |
| 39.37 | 0.292 | 3.04 | 0.108 | -- | -0.247 | -- | -- | -0.0667 | -- | 2.462 | 52 | -- | -- |
| 38.74 | 0.29 | 3.04 | -- | 0.123 | -0.173 | -- | -- | -0.0779 | 11 | 2.488 | 36 | -- | -- |
| 39.43 | 0.293 | 3.04 | 0.106 | -- | -- | -- | -- | -0.0662 | -- | -- | -- | -- | -- |
| 38.77 | 0.291 | 3.04 | -- | 0.124 | -- | -- | -- | -0.0773 | 11 | -- | -- | -- | -- |
| 39.68 | 0.293 | 3.04 | -- | -- | -0.22 | -- | -- | -0.0785 | -- | 2.45 | 53 | -- | -- |
| 39.73 | 0.294 | 3.04 | -- | -- | -- | -- | -- | -0.0779 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.39 | wind | 9.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 32.46 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 4 | 32.55 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 5 | 32.55 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 6 | 32.55 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 13 | 32.65 | wind | 7.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 43 | 32.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 44 | 32.95 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 51 | 33.02 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 70 | 33.07 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 101 | 33.33 | wind | 7.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 102 | 33.33 | wind | 5.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 126 | 33.44 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 22 | NA |
| 132 | 33.48 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 24 | 11 |
| 137 | 33.49 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 145 | 33.50 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 24 | 11 |
| 155 | 33.51 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 161 | 33.52 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 3 | 7 |
| 178 | 33.54 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 185 | 33.56 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 196 | 33.58 | atmosphere | 1000.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 197 | 33.58 | atmosphere | 1000.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 210 | 33.59 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 4 | 7 |
| 224 | 33.60 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 236 | 33.62 | wind | 3.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 266 | 33.64 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 308 | 33.70 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 315 | 33.70 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 330 | 33.72 | wind | 5.0 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 443 | 33.83 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 10 | 8 |
| 539 | 33.97 | atmosphere | 1000.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 541 | 33.97 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 10 |
| 560 | 34.00 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 569 | 34.01 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 586 | 34.04 | atmosphere | 1000.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 608 | 34.08 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 738 | 34.28 | wind | 7.0 | 90 | < th | dose independent | sin | 5 | NA |
| 742 | 34.28 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 777 | 34.32 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 863 | 34.43 | wind | 7.0 | 90 | > th | dose independent | sin | 5 | NA |
| 891 | 34.45 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 911 | 34.46 | atmosphere | 1000.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 922 | 34.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 943 | 34.49 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 973 | 34.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 975 | 34.53 | wind | 7.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 977 | 34.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |