Os06g0220900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0220900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.46 | 0.635 | 7.01 | -2.35 | 0.925 | -0.919 | -1.33 | 2.59 | -1.4 | 9.72 | 1.481 | 1385 | -- | -- |
| 188.64 | 0.64 | 7.08 | -2.44 | 0.932 | -0.809 | -1.12 | -- | -1.4 | 9.72 | 0.9435 | 2571 | -- | -- |
| 188.93 | 0.64 | 7.02 | -2.43 | 0.923 | -0.931 | -- | 2.42 | -1.39 | 9.79 | 1.312 | 1384 | -- | -- |
| 192.12 | 0.646 | 7.04 | -2.57 | 0.911 | -0.878 | -- | -- | -1.35 | 9.77 | 0.7023 | 2450 | -- | -- |
| 239.3 | 0.72 | 7.05 | -2.49 | -- | -0.824 | -- | 2.06 | -1.35 | -- | 1.2 | 1384 | -- | -- |
| 198.73 | 0.661 | 7.03 | -2.65 | 0.872 | -- | -1.02 | -- | -1.23 | 9.87 | -- | -- | -- | -- |
| 202.71 | 0.667 | 7.04 | -2.69 | 0.877 | -- | -- | -- | -1.23 | 9.89 | -- | -- | -- | -- |
| 242.02 | 0.725 | 7.06 | -2.55 | -- | -0.882 | -- | -- | -1.29 | -- | 1.101e-05 | 1404 | -- | -- |
| 230.94 | 0.708 | 6.88 | -- | 0.867 | -2.74 | -- | -- | -0.554 | 9.81 | 25.94 | 47520 | -- | -- |
| 248.74 | 0.737 | 7.06 | -2.7 | -- | -- | -- | -- | -1.23 | -- | -- | -- | -- | -- |
| 393.33 | 0.928 | 6.97 | -- | 0.887 | -- | -- | -- | -0.93 | 10.1 | -- | -- | -- | -- |
| 275.84 | 0.774 | 6.91 | -- | -- | -2.76 | -- | -- | -0.55 | -- | 29.32 | 47520 | -- | -- |
| 440.9 | 0.98 | 6.99 | -- | -- | -- | -- | -- | -0.93 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 178.20 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 5 | 179.37 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 7 | 179.39 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 18 | 179.65 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 19 | 179.65 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 41 | 179.81 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 50 | 179.88 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 1 | 11 |
| 59 | 179.93 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 23 | 13 |
| 76 | 180.08 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 127 | 180.57 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 134 | 180.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 4 |
| 149 | 180.82 | wind | 1 | 43200 | < th | dose independent | rect. | 15 | 13 |
| 177 | 181.09 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 198 | 181.34 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 16 |
| 216 | 181.61 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 12 |
| 259 | 182.11 | temperature | 20 | 90 | > th | dose dependent | sin | 8 | NA |
| 262 | 182.14 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 11 |
| 266 | 182.20 | radiation | 10 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 269 | 182.22 | wind | 1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 275 | 182.29 | radiation | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 277 | 182.32 | wind | 1 | 43200 | < th | dose independent | sin | 15 | NA |
| 282 | 182.38 | radiation | 10 | 4320 | < th | dose independent | rect. | 23 | 8 |
| 287 | 182.39 | radiation | 10 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 317 | 182.53 | wind | 1 | 4320 | > th | dose independent | sin | 13 | NA |
| 325 | 182.60 | wind | 1 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 327 | 182.62 | wind | 1 | 1440 | > th | dose independent | rect. | 16 | 19 |
| 330 | 182.64 | wind | 1 | 1440 | > th | dose independent | rect. | 23 | 19 |
| 336 | 182.67 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 348 | 182.76 | wind | 1 | 1440 | < th | dose dependent | rect. | 23 | 19 |
| 355 | 182.82 | wind | 1 | 4320 | > th | dose independent | rect. | 19 | 14 |
| 359 | 182.85 | wind | 1 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 366 | 182.88 | wind | 1 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 367 | 182.88 | wind | 1 | 4320 | > th | dose independent | rect. | 14 | 16 |
| 369 | 182.89 | wind | 1 | 4320 | > th | dose independent | rect. | 17 | 13 |
| 375 | 182.91 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 379 | 182.93 | wind | 1 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 387 | 182.97 | atmosphere | 1010 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 393 | 183.01 | radiation | 10 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 440 | 183.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 446 | 183.15 | radiation | 1 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 450 | 183.17 | wind | 1 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 451 | 183.17 | wind | 1 | 1440 | < th | dose independent | rect. | 23 | 19 |
| 453 | 183.18 | atmosphere | 1000 | 1440 | < th | dose independent | sin | 7 | NA |
| 468 | 183.22 | atmosphere | 1010 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 475 | 183.25 | wind | 1 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 476 | 183.25 | wind | 1 | 1440 | < th | dose independent | rect. | 16 | 19 |
| 481 | 183.27 | wind | 1 | 4320 | < th | dose independent | sin | 13 | NA |
| 482 | 183.27 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 492 | 183.31 | wind | 1 | 1440 | > th | dose independent | rect. | 23 | 12 |
| 495 | 183.31 | wind | 1 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 506 | 183.34 | wind | 1 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 510 | 183.35 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 522 | 183.38 | wind | 1 | 4320 | < th | dose independent | rect. | 14 | 18 |
| 531 | 183.40 | wind | 1 | 1440 | < th | dose dependent | rect. | 23 | 15 |
| 537 | 183.42 | wind | 1 | 1440 | > th | dose independent | rect. | 24 | 2 |
| 553 | 183.44 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 576 | 183.49 | atmosphere | 1000 | 1440 | > th | dose independent | sin | 7 | NA |
| 587 | 183.52 | wind | 1 | 1440 | > th | dose independent | no | NA | NA |
| 601 | 183.55 | wind | 1 | 43200 | > th | dose independent | sin | 15 | NA |
| 609 | 183.56 | wind | 1 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 620 | 183.59 | wind | 1 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 646 | 183.67 | wind | 1 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 657 | 183.68 | wind | 1 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 658 | 183.69 | wind | 1 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 672 | 183.71 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 11 |
| 696 | 183.76 | radiation | 40 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 709 | 183.78 | wind | 1 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 718 | 183.79 | wind | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 727 | 183.80 | wind | 1 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 734 | 183.81 | wind | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 771 | 183.89 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 774 | 183.89 | wind | 1 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 788 | 183.92 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 11 |
| 791 | 183.93 | wind | 1 | 1440 | < th | dose independent | no | NA | NA |
| 807 | 183.97 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 6 |
| 816 | 183.99 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 6 |
| 842 | 184.04 | wind | 1 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 845 | 184.04 | radiation | 1 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 854 | 184.07 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 868 | 184.09 | radiation | 40 | 4320 | < th | dose dependent | rect. | 24 | 7 |
| 878 | 184.10 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 881 | 184.11 | radiation | 40 | 4320 | < th | dose dependent | rect. | 21 | 10 |
| 887 | 184.12 | wind | 1 | 1440 | < th | dose dependent | sin | 4 | NA |
| 888 | 184.12 | temperature | 20 | 720 | > th | dose dependent | sin | 12 | NA |
| 895 | 184.13 | wind | 1 | 1440 | > th | dose independent | sin | 6 | NA |
| 903 | 184.15 | wind | 1 | 1440 | < th | dose independent | rect. | 23 | 12 |
| 908 | 184.15 | wind | 1 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 927 | 184.18 | wind | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 929 | 184.18 | radiation | 40 | 4320 | < th | dose dependent | rect. | 3 | 4 |
| 949 | 184.20 | wind | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 955 | 184.21 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 985 | 184.24 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 10 |
| 998 | 184.27 | wind | 1 | 4320 | > th | dose independent | rect. | 21 | 5 |