Os06g0220100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0220100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.76 | 0.651 | 2.91 | 0.259 | 0.103 | -0.339 | -0.414 | 0.644 | 0.332 | 15 | 25 | 34 | -- | -- |
| 193.12 | 0.647 | 2.93 | 0.0732 | 0.0996 | -0.316 | -0.0619 | -- | 0.272 | 14.7 | 25.1 | 30 | -- | -- |
| 192.22 | 0.646 | 2.91 | 0.201 | 0.108 | -0.342 | -- | 0.468 | 0.318 | 14.8 | 25.01 | 34 | -- | -- |
| 193.03 | 0.647 | 2.93 | 0.0998 | 0.119 | -0.326 | -- | -- | 0.252 | 15 | 25.4 | 34 | -- | -- |
| 192.63 | 0.646 | 2.92 | 0.186 | -- | -0.292 | -- | 0.463 | 0.289 | -- | 25.1 | 33 | -- | -- |
| 199.08 | 0.661 | 2.96 | -0.00765 | 0.122 | -- | 0.205 | -- | 0.106 | 3.36 | -- | -- | -- | -- |
| 199.21 | 0.661 | 2.96 | -0.0115 | 0.122 | -- | -- | -- | 0.105 | 3.15 | -- | -- | -- | -- |
| 192.57 | 0.646 | 2.93 | 0.0756 | -- | -0.29 | -- | -- | 0.24 | -- | 25.5 | 94 | -- | -- |
| 192.04 | 0.645 | 2.93 | -- | 0.123 | -0.331 | -- | -- | 0.246 | 15.2 | 25.4 | 94 | -- | -- |
| 200.06 | 0.661 | 2.96 | -0.0063 | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
| 199.22 | 0.66 | 2.96 | -- | 0.122 | -- | -- | -- | 0.107 | 3.15 | -- | -- | -- | -- |
| 192.68 | 0.646 | 2.94 | -- | -- | -0.284 | -- | -- | 0.223 | -- | 25.48 | 94 | -- | -- |
| 200.06 | 0.66 | 2.96 | -- | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 178.85 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 2 | 178.88 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 4 | 178.90 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 6 | 178.92 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 8 | 178.92 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 13 | 178.95 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 16 | 178.96 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 21 | 178.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 23 | 178.99 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 25 | 178.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 29 | 178.99 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 31 | 178.99 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 36 | 178.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 37 | 178.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 38 | 178.99 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 39 | 178.99 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 44 | 178.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 51 | 179.10 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 54 | 179.15 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 62 | 179.34 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 98 | 179.57 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 102 | 179.94 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 103 | 179.94 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 104 | 179.96 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 110 | 180.57 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 131 | 181.70 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 132 | 181.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 135 | 181.70 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 139 | 181.70 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 148 | 181.70 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 149 | 181.70 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 169 | 181.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 172 | 181.70 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 184 | 182.11 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 193 | 184.62 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 217 | 186.43 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 245 | 187.49 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 251 | 187.75 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 334 | 189.69 | wind | 1.0 | 10 | > th | dose independent | sin | 14 | NA |
| 343 | 189.81 | temperature | 25.0 | 30 | > th | dose independent | rect. | 10 | 23 |
| 351 | 189.91 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 352 | 189.94 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 372 | 190.05 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 4 |
| 375 | 190.09 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 385 | 190.20 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 387 | 190.20 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 12 |
| 401 | 190.29 | temperature | 25.0 | 90 | > th | dose independent | rect. | 3 | 22 |
| 426 | 190.59 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 442 | 190.72 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 443 | 190.72 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 452 | 190.75 | temperature | 25.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 454 | 190.76 | wind | 5.0 | 10 | > th | dose dependent | rect. | 21 | 1 |
| 463 | 190.83 | wind | 5.0 | 10 | > th | dose independent | rect. | 21 | 1 |
| 466 | 190.83 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 469 | 190.89 | wind | 5.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 473 | 190.92 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 483 | 190.97 | temperature | 25.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 514 | 191.14 | wind | 7.0 | 90 | > th | dose independent | rect. | 7 | 2 |
| 525 | 191.15 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 526 | 191.16 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 6 |
| 528 | 191.17 | wind | 7.0 | 90 | > th | dose dependent | rect. | 7 | 2 |
| 566 | 191.24 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 569 | 191.25 | temperature | 25.0 | 30 | > th | dose independent | rect. | 16 | 23 |
| 576 | 191.28 | wind | 5.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 595 | 191.37 | humidity | 80.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 616 | 191.47 | wind | 5.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 633 | 191.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 642 | 191.56 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 23 |
| 652 | 191.60 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 656 | 191.61 | wind | 3.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 683 | 191.67 | temperature | 25.0 | 30 | < th | dose independent | rect. | 8 | 19 |
| 684 | 191.67 | temperature | 25.0 | 10 | < th | dose independent | rect. | 16 | 23 |
| 689 | 191.68 | wind | 5.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 699 | 191.70 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 708 | 191.72 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 7 |
| 714 | 191.74 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 730 | 191.77 | temperature | 25.0 | 10 | < th | dose independent | rect. | 20 | 23 |
| 740 | 191.80 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 741 | 191.80 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 760 | 191.83 | temperature | 25.0 | 30 | > th | dose independent | no | NA | NA |
| 768 | 191.85 | temperature | 25.0 | 10 | < th | dose independent | rect. | 9 | 23 |
| 783 | 191.88 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 784 | 191.88 | temperature | 25.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 801 | 191.91 | temperature | 25.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 808 | 191.92 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 811 | 191.92 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 817 | 191.94 | temperature | 25.0 | 10 | < th | dose independent | no | NA | NA |
| 818 | 191.94 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 4 |
| 835 | 191.96 | temperature | 25.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 843 | 191.98 | temperature | 25.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 860 | 192.03 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 870 | 192.04 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 885 | 192.08 | wind | 5.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 889 | 192.08 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 23 |
| 896 | 192.08 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 10 |
| 918 | 192.13 | wind | 5.0 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 925 | 192.15 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 936 | 192.17 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 8 | 15 |
| 972 | 192.25 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 976 | 192.26 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 23 |
| 985 | 192.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 17 |