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Os06g0218300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0237) R2 : 0.625
β1 : 1.54 (0.0868) R2dD : 0.269 R2D : 0.109
β2 : 1.01 (0.0619) R2dC : 0.218 R2C : 0.174
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.796 (0.0506) R2dN8 : 0.273 R2N8 : 0.13
σ : 0.446
deviance : 90.62
__
_____
C
peak time of C : 5.87
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.41 0.427 11.6 1.75 0.999 0.828 0.71 2.41 0.767 6.31 5 1065 -- --
86.92 0.434 11.5 1.78 0.988 0.656 0.904 -- 0.775 6.08 4.946 1189 -- --
83.65 0.426 11.6 1.76 1 0.832 -- 2.41 0.766 6.27 5.1 1063 -- --
86.87 0.434 11.5 1.68 1.01 0.551 -- -- 0.783 6.35 4.3 1039 -- --
133.67 0.538 11.6 1.83 -- 0.854 -- 2.44 0.778 -- 4.3 1189 -- --
89.22 0.443 11.5 1.54 1 -- 0.757 -- 0.799 5.89 -- -- -- --
90.62 0.446 11.5 1.54 1.01 -- -- -- 0.796 5.87 -- -- -- --
128.24 0.53 11.6 1.45 -- -0.425 -- -- 0.803 -- 3.8 1245 -- --
96.44 0.457 11.6 -- 1 -1.26 -- -- 0.36 5.95 6.894 47520 -- --
143.06 0.559 11.5 1.57 -- -- -- -- 0.82 -- -- -- -- --
153.24 0.579 11.6 -- 1.03 -- -- -- 0.625 5.8 -- -- -- --
146.37 0.563 11.6 -- -- -1.5 -- -- 0.535 -- 6.1 33685 -- --
208.23 0.674 11.6 -- -- -- -- -- 0.645 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 77.09 temperature 30 4320 > th dose dependent rect. 8 1
15 77.29 temperature 30 4320 > th dose independent rect. 8 1
29 78.02 radiation 40 1440 < th dose independent rect. 24 9
47 78.55 radiation 40 1440 < th dose independent rect. 17 16
49 78.58 radiation 40 1440 > th dose independent rect. 8 1
68 78.74 radiation 40 1440 < th dose independent rect. 8 1
85 78.99 temperature 30 4320 < th dose independent rect. 8 1
91 79.33 temperature 30 4320 < th dose independent rect. 1 8
93 79.42 temperature 30 4320 < th dose independent rect. 3 6
98 79.85 temperature 30 4320 < th dose independent rect. 22 11
99 79.86 wind 1 4320 < th dose dependent rect. 6 2
114 79.92 wind 1 14400 > th dose independent rect. 9 2
141 80.28 temperature 30 4320 < th dose independent rect. 20 14
143 80.32 wind 1 14400 < th dose independent rect. 9 2
151 80.63 atmosphere 995 14400 > th dose independent rect. 12 8
156 80.69 atmosphere 995 14400 < th dose independent rect. 15 2
182 80.71 atmosphere 995 14400 > th dose independent rect. 7 13
191 80.73 atmosphere 995 14400 > th dose independent rect. 15 5
202 80.74 atmosphere 1000 30 > th dose independent rect. 5 18
213 80.81 atmosphere 995 14400 < th dose dependent rect. 15 4
236 80.89 atmosphere 995 14400 > th dose independent rect. 18 2
238 80.92 temperature 25 4320 < th dose independent rect. 1 2
367 81.28 wind 9 14400 < th dose independent rect. 13 1
369 81.31 wind 9 14400 > th dose independent rect. 22 16
371 81.33 humidity 80 14400 > th dose independent rect. 3 1
378 81.35 temperature 25 4320 > th dose independent rect. 24 1
402 81.42 humidity 90 14400 > th dose dependent rect. 3 1
418 81.43 wind 3 43200 < th dose independent rect. 11 2
423 81.45 wind 9 14400 < th dose independent rect. 22 16
424 81.45 temperature 20 10 > th dose dependent rect. 17 7
430 81.50 wind 1 14400 < th dose dependent rect. 9 2
431 81.51 humidity 80 14400 < th dose dependent rect. 3 1
432 81.51 wind 9 14400 > th dose dependent rect. 22 16
455 81.58 wind 9 14400 > th dose independent rect. 13 1
456 81.58 wind 9 14400 > th dose independent rect. 3 11
484 81.63 temperature 25 270 > th dose dependent rect. 16 15
485 81.64 humidity 80 14400 < th dose independent rect. 3 1
496 81.70 wind 5 720 < th dose independent rect. 7 11
501 81.73 wind 9 14400 < th dose independent rect. 3 11
503 81.74 wind 7 14400 > th dose dependent rect. 12 1
519 81.84 atmosphere 1000 270 < th dose independent rect. 9 16
528 81.87 temperature 25 270 > th dose dependent rect. 16 12
530 81.88 atmosphere 1005 43200 < th dose independent rect. 22 1
535 81.89 temperature 25 270 > th dose dependent rect. 16 8
541 81.91 temperature 25 10 > th dose dependent rect. 17 14
554 81.96 wind 7 14400 > th dose dependent rect. 4 10
566 82.01 wind 9 14400 > th dose independent rect. 9 5
585 82.07 wind 7 14400 > th dose dependent rect. 10 4
588 82.08 temperature 30 4320 > th dose dependent sin 9 NA
591 82.09 wind 3 43200 > th dose independent rect. 11 2
593 82.09 wind 7 1440 < th dose dependent rect. 12 1
599 82.12 atmosphere 1005 43200 > th dose independent rect. 3 1
604 82.13 atmosphere 1005 43200 < th dose independent rect. 3 1
611 82.14 temperature 25 270 > th dose dependent sin 12 NA
612 82.14 wind 3 43200 < th dose dependent rect. 11 1
613 82.14 wind 3 43200 < th dose dependent rect. 23 6
614 82.15 atmosphere 1000 270 < th dose independent sin 18 NA
639 82.17 wind 3 43200 < th dose dependent rect. 21 8
669 82.21 wind 7 14400 > th dose dependent rect. 7 7
674 82.23 atmosphere 995 720 > th dose independent rect. 9 14
678 82.24 atmosphere 1005 43200 < th dose independent rect. 11 1
693 82.26 radiation 10 4320 > th dose independent rect. 17 13
699 82.26 temperature 25 10 > th dose dependent rect. 17 11
701 82.27 temperature 30 4320 > th dose independent sin 9 NA
702 82.27 atmosphere 995 720 > th dose independent rect. 11 10
729 82.29 wind 9 14400 < th dose independent rect. 10 4
730 82.29 wind 5 1440 < th dose independent rect. 23 17
735 82.31 wind 1 1440 > th dose dependent rect. 12 1
736 82.31 temperature 20 1440 > th dose dependent rect. 1 3
740 82.31 temperature 20 10 > th dose dependent rect. 17 9
746 82.32 wind 5 1440 < th dose independent rect. 23 19
760 82.33 temperature 20 1440 > th dose dependent rect. 20 10
763 82.34 wind 5 1440 > th dose independent rect. 23 17
768 82.34 temperature 20 1440 > th dose dependent rect. 20 8
771 82.35 temperature 30 4320 < th dose independent sin 9 NA
779 82.35 wind 1 4320 < th dose dependent rect. 6 5
789 82.36 wind 1 43200 < th dose dependent rect. 4 21
796 82.37 atmosphere 995 720 > th dose independent rect. 9 7
816 82.38 radiation 10 4320 > th dose independent rect. 17 1
822 82.38 atmosphere 1005 43200 < th dose independent rect. 21 7
829 82.38 wind 5 1440 > th dose independent rect. 23 19
852 82.40 wind 3 43200 < th dose dependent rect. 21 10
855 82.41 atmosphere 1005 43200 > th dose independent rect. 1 4
861 82.41 atmosphere 995 720 > th dose independent rect. 9 22
869 82.41 atmosphere 1000 270 < th dose dependent rect. 8 18
892 82.44 atmosphere 1005 43200 > th dose independent rect. 11 1
934 82.46 atmosphere 1005 43200 > th dose independent rect. 1 1
936 82.46 atmosphere 1005 43200 < th dose independent rect. 19 5
949 82.47 radiation 20 4320 < th dose independent rect. 17 15
951 82.47 atmosphere 995 720 > th dose independent rect. 24 23
965 82.48 wind 5 720 > th dose independent rect. 6 10
981 82.49 atmosphere 995 720 > th dose independent rect. 4 17
990 82.50 atmosphere 1005 14400 < th dose independent rect. 13 1
993 82.50 wind 1 43200 > th dose independent rect. 19 18
994 82.50 temperature 20 1440 > th dose dependent sin 11 NA