Os06g0215000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0215000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.12 | 0.498 | 3.19 | 0.86 | 0.145 | 148 | -0.155 | 419 | 0.0356 | 12.4 | 9.597 | 7 | -- | -- |
| 14217.09 | 5.55 | 2.7 | 2.57 | 2.21 | 106 | 44.9 | -- | 1.06 | 17.5 | 9.542 | 6 | -- | -- |
| 112.23 | 0.493 | 3.19 | 0.854 | 0.145 | 148 | -- | 419 | 0.0344 | 12.4 | 9.597 | 7 | -- | -- |
| 112.47 | 0.494 | 2.86 | -0.06 | 0.123 | 4.86 | -- | -- | 0.0721 | 12.1 | 10.9 | 11 | -- | -- |
| 113.54 | 0.496 | 3.19 | 0.855 | -- | 148 | -- | 419 | 0.0361 | -- | 9.598 | 6 | -- | -- |
| 134.92 | 0.545 | 2.88 | -0.116 | 0.169 | -- | -0.274 | -- | 0.0188 | 13.6 | -- | -- | -- | -- |
| 135.22 | 0.545 | 2.88 | -0.125 | 0.169 | -- | -- | -- | 0.017 | 13.3 | -- | -- | -- | -- |
| 113.57 | 0.496 | 2.88 | -0.0647 | -- | 4.86 | -- | -- | 0.0346 | -- | 10.76 | 23 | -- | -- |
| 112.38 | 0.494 | 2.87 | -- | 0.144 | 4.84 | -- | -- | 0.0426 | 12.4 | 10.4 | 9 | -- | -- |
| 136.97 | 0.547 | 2.88 | -0.132 | -- | -- | -- | -- | 0.0135 | -- | -- | -- | -- | -- |
| 135.63 | 0.545 | 2.88 | -- | 0.171 | -- | -- | -- | 0.031 | 13.4 | -- | -- | -- | -- |
| 113.68 | 0.497 | 2.88 | -- | -- | 4.88 | -- | -- | 0.0419 | -- | 10.76 | 21 | -- | -- |
| 137.43 | 0.547 | 2.88 | -- | -- | -- | -- | -- | 0.0282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.03 | radiation | 1 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 12 | 108.60 | humidity | 60 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 14 | 110.23 | wind | 9 | 10 | > th | dose dependent | rect. | 13 | 3 |
| 18 | 110.66 | wind | 9 | 30 | > th | dose independent | rect. | 13 | 3 |
| 38 | 111.96 | wind | 9 | 30 | > th | dose dependent | rect. | 15 | 3 |
| 44 | 112.17 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 52 | 112.17 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 60 | 112.45 | humidity | 60 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 250 | 117.13 | wind | 9 | 30 | > th | dose dependent | sin | 14 | NA |
| 258 | 117.85 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 11 |
| 308 | 119.86 | humidity | 60 | 10 | < th | dose independent | rect. | 18 | 16 |
| 325 | 121.68 | radiation | 1 | 10 | > th | dose independent | rect. | 18 | 1 |
| 358 | 123.13 | wind | 9 | 30 | > th | dose independent | sin | 14 | NA |
| 361 | 123.23 | temperature | 30 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 376 | 123.24 | humidity | 60 | 10 | < th | dose independent | rect. | 18 | 1 |
| 528 | 124.92 | wind | 9 | 30 | < th | dose independent | sin | 14 | NA |
| 661 | 126.35 | humidity | 70 | 10 | < th | dose independent | rect. | 14 | 21 |
| 715 | 126.77 | humidity | 70 | 90 | < th | dose dependent | rect. | 12 | 22 |
| 743 | 126.92 | humidity | 70 | 90 | < th | dose independent | rect. | 13 | 21 |
| 776 | 127.15 | humidity | 70 | 10 | < th | dose independent | rect. | 15 | 4 |
| 814 | 127.29 | humidity | 70 | 10 | < th | dose dependent | rect. | 13 | 22 |
| 846 | 127.34 | wind | 9 | 10 | > th | dose dependent | no | NA | NA |
| 924 | 127.34 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 23 |