Os06g0211700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Xyloglucan fucosyltransferase family protein.
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Os06g0211700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Xyloglucan fucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.14 | 0.655 | 2.42 | 1.16 | 0.195 | -48.2 | -0.0866 | 122 | -0.0297 | 10.7 | 44 | 415 | -- | -- |
| 206.45 | 0.674 | 2.9 | 0.119 | 0.186 | -0.361 | -0.0627 | -- | -0.0373 | 11.9 | 44 | 415 | -- | -- |
| 193.64 | 0.648 | 2.38 | 1.27 | 0.201 | -48.1 | -- | 122 | -0.0299 | 10.9 | 43.94 | 415 | -- | -- |
| 196.6 | 0.653 | 2.9 | 0.0308 | 0.177 | 1.88 | -- | -- | -0.0368 | 12.9 | 45 | 398 | -- | -- |
| 196.12 | 0.652 | 2.39 | 1.26 | -- | -47.8 | -- | 121 | -0.0286 | -- | 44 | 415 | -- | -- |
| 206.8 | 0.674 | 2.89 | 0.108 | 0.173 | -- | -0.2 | -- | -0.0364 | 11.2 | -- | -- | -- | -- |
| 206.86 | 0.674 | 2.9 | 0.101 | 0.178 | -- | -- | -- | -0.036 | 12.1 | -- | -- | -- | -- |
| 197.93 | 0.655 | 2.9 | -0.0128 | -- | 1.93 | -- | -- | -0.025 | -- | 44.64 | 398 | -- | -- |
| 196.17 | 0.652 | 2.9 | -- | 0.181 | 1.82 | -- | -- | -0.0409 | 11.2 | 44.99 | 401 | -- | -- |
| 208.85 | 0.675 | 2.9 | 0.0957 | -- | -- | -- | -- | -0.0386 | -- | -- | -- | -- | -- |
| 207.13 | 0.673 | 2.9 | -- | 0.177 | -- | -- | -- | -0.0473 | 12.1 | -- | -- | -- | -- |
| 197.94 | 0.655 | 2.9 | -- | -- | 1.93 | -- | -- | -0.0273 | -- | 44.81 | 398 | -- | -- |
| 209.09 | 0.675 | 2.9 | -- | -- | -- | -- | -- | -0.0492 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 184.98 | wind | 9.0 | 90 | > th | dose dependent | rect. | 12 | 3 |
| 2 | 185.15 | wind | 9.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 3 | 185.17 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 3 |
| 7 | 185.72 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 3 |
| 11 | 186.30 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 23 | 186.30 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 55 | 187.84 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 57 | 189.85 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 77 | 191.84 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 81 | 192.34 | wind | 9.0 | 270 | > th | dose dependent | rect. | 9 | 5 |
| 96 | 192.70 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 98 | 192.70 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 107 | 192.99 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 122 | 193.21 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 2 |
| 157 | 193.36 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 15 | 2 |
| 278 | 193.85 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 363 | 194.01 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 22 | 15 |
| 364 | 194.03 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 1 | 12 |
| 383 | 194.19 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 396 | 194.25 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 406 | 194.41 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 10 | 5 |
| 416 | 194.58 | humidity | 50.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 420 | 194.63 | wind | 9.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 440 | 194.73 | humidity | 50.0 | 90 | > th | dose independent | sin | 12 | NA |
| 449 | 194.88 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 450 | 194.89 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 19 | 18 |
| 472 | 195.02 | humidity | 50.0 | 90 | < th | dose independent | sin | 12 | NA |
| 479 | 195.26 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 515 | 195.42 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 519 | 195.48 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 535 | 195.57 | wind | 9.0 | 270 | < th | dose independent | sin | 6 | NA |
| 540 | 195.61 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 10 | 3 |
| 550 | 195.72 | wind | 9.0 | 270 | > th | dose independent | sin | 6 | NA |
| 603 | 196.08 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 12 | 22 |
| 648 | 196.48 | humidity | 50.0 | 720 | < th | dose independent | rect. | 11 | 1 |
| 666 | 196.48 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 11 | 1 |
| 801 | 196.81 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 812 | 196.90 | radiation | 10.0 | 90 | < th | dose independent | rect. | 12 | 3 |
| 823 | 197.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 854 | 197.14 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 855 | 197.14 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 956 | 197.50 | humidity | 50.0 | 720 | > th | dose independent | rect. | 12 | 8 |
| 968 | 197.54 | temperature | 30.0 | 30 | > th | dose independent | rect. | 14 | 2 |
| 970 | 197.54 | humidity | 50.0 | 720 | > th | dose independent | rect. | 12 | 17 |
| 976 | 197.57 | wind | 7.0 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 991 | 197.64 | wind | 3.0 | 90 | < th | dose dependent | rect. | 14 | 6 |