Os06g0211600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1).
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Os06g0211600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Galactoside 2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase) (PsFT1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.34 | 0.478 | 2.88 | -0.412 | 0.0293 | 0.398 | 0.186 | -3.06 | -0.0642 | 16 | 30 | 10 | -- | -- |
| 105.16 | 0.481 | 2.86 | -0.168 | 0.0349 | 0.154 | 0.0476 | -- | -0.0417 | 14.2 | 30 | 10 | -- | -- |
| 103.43 | 0.474 | 2.88 | -0.403 | 0.03 | 0.396 | -- | -2.97 | -0.0618 | 15.3 | 30 | 9 | -- | -- |
| 105.16 | 0.481 | 2.86 | -0.166 | 0.0345 | 0.156 | -- | -- | -0.0415 | 13.6 | 30.06 | 8 | -- | -- |
| 103.47 | 0.474 | 2.88 | -0.404 | -- | 0.409 | -- | -2.97 | -0.0616 | -- | 30 | 9 | -- | -- |
| 105.99 | 0.483 | 2.86 | -0.153 | 0.0794 | -- | 0.0945 | -- | -0.0434 | 14.7 | -- | -- | -- | -- |
| 106.02 | 0.482 | 2.86 | -0.151 | 0.0794 | -- | -- | -- | -0.0429 | 14.4 | -- | -- | -- | -- |
| 105.23 | 0.48 | 2.86 | -0.169 | -- | 0.17 | -- | -- | -0.042 | -- | 30.06 | 8 | -- | -- |
| 105.89 | 0.482 | 2.85 | -- | 0.0411 | 0.143 | -- | -- | -0.0232 | 13.9 | 30.08 | 8 | -- | -- |
| 106.39 | 0.482 | 2.86 | -0.154 | -- | -- | -- | -- | -0.0449 | -- | -- | -- | -- | -- |
| 106.61 | 0.483 | 2.85 | -- | 0.0823 | -- | -- | -- | -0.0261 | 14.5 | -- | -- | -- | -- |
| 105.98 | 0.481 | 2.85 | -- | -- | 0.16 | -- | -- | -0.0235 | -- | 30.06 | 8 | -- | -- |
| 107.01 | 0.483 | 2.85 | -- | -- | -- | -- | -- | -0.0278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.62 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 94.42 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 5 | 94.42 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 10 | 95.20 | wind | 9.0 | 90 | > th | dose dependent | rect. | 16 | 18 |
| 11 | 95.21 | wind | 9.0 | 90 | > th | dose dependent | rect. | 16 | 6 |
| 28 | 95.46 | wind | 9.0 | 90 | > th | dose independent | rect. | 16 | 10 |
| 37 | 95.47 | wind | 9.0 | 90 | > th | dose independent | rect. | 16 | 6 |
| 41 | 95.48 | wind | 9.0 | 90 | > th | dose independent | rect. | 16 | 4 |
| 77 | 95.90 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 78 | 96.18 | wind | 9.0 | 90 | < th | dose independent | sin | 13 | NA |
| 79 | 96.22 | wind | 9.0 | 90 | > th | dose independent | sin | 13 | NA |
| 82 | 96.71 | wind | 9.0 | 90 | > th | dose dependent | sin | 13 | NA |
| 84 | 96.75 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 92 | 96.79 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 109 | 96.85 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 111 | 96.85 | wind | 9.0 | 90 | > th | dose independent | rect. | 12 | 10 |
| 112 | 96.85 | wind | 9.0 | 90 | > th | dose independent | rect. | 12 | 14 |
| 187 | 96.96 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 192 | 96.96 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 214 | 97.56 | wind | 9.0 | 90 | > th | dose dependent | rect. | 12 | 6 |
| 216 | 97.69 | wind | 9.0 | 90 | > th | dose dependent | rect. | 12 | 22 |
| 217 | 97.70 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 3 |
| 219 | 97.70 | wind | 9.0 | 90 | > th | dose dependent | rect. | 12 | 10 |
| 264 | 97.72 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 296 | 97.96 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 305 | 98.88 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 327 | 99.33 | atmosphere | 1005.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 386 | 100.04 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 410 | 100.31 | temperature | 25.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 416 | 100.32 | humidity | 70.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 434 | 100.39 | wind | 9.0 | 10 | > th | dose independent | rect. | 17 | 5 |
| 467 | 100.49 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 1 |
| 549 | 101.06 | wind | 9.0 | 10 | > th | dose independent | sin | 12 | NA |
| 711 | 101.35 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 7 |
| 762 | 101.51 | wind | 9.0 | 10 | < th | dose independent | sin | 12 | NA |
| 792 | 101.57 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 1 |
| 796 | 101.57 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 834 | 101.68 | atmosphere | 1010.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 942 | 101.87 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 949 | 101.91 | radiation | 10.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 986 | 102.03 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 14 | 2 |