Os06g0211300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sterol-binding domain containing protein.
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Os06g0211300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sterol-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 232.66 | 0.717 | 4.06 | -0.275 | 0.775 | 0.657 | 1.19 | 2.74 | -0.356 | 15.5 | 52 | 4732 | -- | -- |
| 241.75 | 0.724 | 4.06 | -0.0389 | 0.794 | 0.749 | 0.982 | -- | -0.282 | 15.5 | 39.16 | 4714 | -- | -- |
| 235.5 | 0.715 | 4.06 | -0.273 | 0.69 | 0.652 | -- | 2.83 | -0.359 | 15.7 | 51.89 | 5403 | -- | -- |
| 242.29 | 0.725 | 4.08 | -0.117 | 0.723 | 0.718 | -- | -- | -0.312 | 15.5 | 34.97 | 16175 | -- | -- |
| 260.89 | 0.756 | 4.1 | 0.00356 | -- | -0.73 | -- | 0.0147 | -0.478 | -- | 52.03 | 5452 | -- | -- |
| 248.36 | 0.739 | 4.1 | -0.004 | 0.723 | -- | 1.02 | -- | -0.457 | 15.3 | -- | -- | -- | -- |
| 251.66 | 0.743 | 4.1 | 0.0157 | 0.73 | -- | -- | -- | -0.451 | 15.4 | -- | -- | -- | -- |
| 259.59 | 0.754 | 4.11 | 0.00549 | -- | -0.676 | -- | -- | -0.488 | -- | 58.98 | 5435 | -- | -- |
| 242.44 | 0.725 | 4.07 | -- | 0.734 | 0.694 | -- | -- | -0.288 | 15.4 | 12.15 | 16178 | -- | -- |
| 281.63 | 0.784 | 4.1 | -0.0151 | -- | -- | -- | -- | -0.47 | -- | -- | -- | -- | -- |
| 251.67 | 0.742 | 4.1 | -- | 0.729 | -- | -- | -- | -0.453 | 15.4 | -- | -- | -- | -- |
| 259.23 | 0.752 | 4.11 | -- | -- | -0.672 | -- | -- | -0.492 | -- | 60 | 5448 | -- | -- |
| 281.64 | 0.783 | 4.1 | -- | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 227.94 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 10 | 229.20 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 19 | 230.08 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 26 | 230.31 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 27 | 230.31 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 16 | 11 |
| 29 | 230.31 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 62 | 230.55 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 74 | 230.61 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 85 | 230.81 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 86 | 230.81 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 15 | 15 |
| 96 | 230.94 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 15 | 7 |
| 100 | 230.96 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 118 | 231.01 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 123 | 231.03 | humidity | 70.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 162 | 231.24 | humidity | 70.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 168 | 231.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 16 |
| 178 | 231.40 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 11 |
| 185 | 231.44 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 203 | 231.55 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 205 | 231.55 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 211 | 231.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 218 | 231.62 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 225 | 231.67 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 236 | 231.74 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 238 | 231.74 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 2 |
| 265 | 231.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 297 | 231.94 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 313 | 232.02 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 329 | 232.11 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 351 | 232.17 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 352 | 232.18 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 365 | 232.23 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 14 |
| 371 | 232.25 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 373 | 232.26 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 452 | 232.48 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 463 | 232.51 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 489 | 232.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 542 | 232.68 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 15 | 7 |
| 562 | 232.71 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 594 | 232.77 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 598 | 232.78 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 610 | 232.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 612 | 232.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 675 | 232.88 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 19 |
| 679 | 232.89 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 700 | 232.93 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 704 | 232.93 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 5 |
| 719 | 232.95 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 720 | 232.96 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 731 | 232.97 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 740 | 232.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 5 |
| 748 | 232.99 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 758 | 233.01 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 766 | 233.01 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 767 | 233.02 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 784 | 233.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 21 |
| 785 | 233.06 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 804 | 233.08 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 809 | 233.08 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 15 | 20 |
| 816 | 233.11 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 829 | 233.11 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 17 | 18 |
| 885 | 233.17 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 15 | 9 |
| 943 | 233.25 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 6 | 20 |
| 972 | 233.28 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 12 | 4 |