Os06g0210400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Legume lectin, beta domain containing protein.
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Os06g0210400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Legume lectin, beta domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.69 | 0.64 | 7.33 | 2.31 | 1.27 | 3.29 | 0.266 | -6.73 | 0.412 | 2.38 | 20.08 | 4002 | -- | -- |
| 197.15 | 0.654 | 7.19 | 3.4 | 1.46 | 3.81 | -0.0288 | -- | 0.345 | 2.36 | 15.53 | 9186 | -- | -- |
| 185.94 | 0.635 | 7.33 | 2.33 | 1.27 | 3.29 | -- | -6.6 | 0.417 | 2.39 | 20 | 4003 | -- | -- |
| 197.09 | 0.654 | 7.2 | 3.4 | 1.45 | 3.84 | -- | -- | 0.346 | 2.3 | 15.31 | 9149 | -- | -- |
| 278.51 | 0.777 | 7.32 | 2.28 | -- | 3.55 | -- | -6.65 | 0.409 | -- | 20.36 | 3932 | -- | -- |
| 463.19 | 1.01 | 6.92 | 5.54 | 1.55 | -- | 0.151 | -- | 1.57 | 2.13 | -- | -- | -- | -- |
| 463.27 | 1.01 | 6.92 | 5.54 | 1.55 | -- | -- | -- | 1.57 | 2.13 | -- | -- | -- | -- |
| 303.22 | 0.811 | 7.2 | 3.49 | -- | 3.88 | -- | -- | 0.355 | -- | 15.93 | 8271 | -- | -- |
| 295.31 | 0.8 | 7.4 | -- | 1.44 | 5.03 | -- | -- | -0.549 | 2.21 | 7.271 | 47520 | -- | -- |
| 606.31 | 1.15 | 6.91 | 5.6 | -- | -- | -- | -- | 1.61 | -- | -- | -- | -- | -- |
| 1270.84 | 1.67 | 7.06 | -- | 1.65 | -- | -- | -- | 0.952 | 2.2 | -- | -- | -- | -- |
| 388.02 | 0.917 | 7.38 | -- | -- | 5.33 | -- | -- | -0.503 | -- | 8.321 | 24150 | -- | -- |
| 1433.55 | 1.77 | 7.05 | -- | -- | -- | -- | -- | 0.984 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 179.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 14 |
| 16 | 181.43 | temperature | 20 | 1440 | > th | dose dependent | sin | 9 | NA |
| 18 | 181.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 20 | 181.78 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 54 | 183.94 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 74 | 184.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 106 | 185.56 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 111 | 185.63 | temperature | 20 | 4320 | > th | dose dependent | rect. | 16 | 12 |
| 239 | 187.57 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 246 | 187.67 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 253 | 187.75 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 303 | 188.54 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 306 | 188.60 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 320 | 188.75 | temperature | 20 | 4320 | > th | dose dependent | rect. | 7 | 23 |
| 610 | 193.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 632 | 194.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 16 |
| 638 | 194.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 16 |
| 667 | 194.86 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 8 |
| 689 | 195.31 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 767 | 196.34 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 883 | 197.60 | temperature | 25 | 4320 | > th | dose independent | sin | 23 | NA |
| 935 | 198.03 | temperature | 20 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 941 | 198.07 | temperature | 25 | 4320 | < th | dose independent | sin | 23 | NA |
| 989 | 198.46 | temperature | 20 | 14400 | < th | dose independent | rect. | 22 | 1 |