Os06g0209400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0209400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 253.84 | 0.749 | 5.24 | 1 | 1.29 | -1.67 | 1.16 | 14.4 | -1.17 | 9.8 | 26.4 | 4435 | -- | -- |
| 293.94 | 0.805 | 5.62 | -2.12 | 1.39 | -0.745 | 1.16 | -- | -1.64 | 10.2 | 8.775 | 47520 | -- | -- |
| 258.72 | 0.749 | 5.24 | 1.07 | 1.28 | -1.74 | -- | 14.8 | -1.19 | 9.9 | 26.7 | 4474 | -- | -- |
| 294.08 | 0.799 | 5.68 | -2.81 | 1.31 | 0.629 | -- | -- | -1.95 | 9.74 | 32.35 | 47520 | -- | -- |
| 355.06 | 0.878 | 5.26 | 1.25 | -- | -1.97 | -- | 15.8 | -1.17 | -- | 26.67 | 4210 | -- | -- |
| 299.13 | 0.811 | 5.64 | -2.27 | 1.3 | -- | 1.22 | -- | -1.75 | 9.7 | -- | -- | -- | -- |
| 304.74 | 0.817 | 5.64 | -2.22 | 1.3 | -- | -- | -- | -1.74 | 9.74 | -- | -- | -- | -- |
| 395.68 | 0.926 | 5.72 | -2.83 | -- | 0.598 | -- | -- | -1.95 | -- | 32.4 | 47520 | -- | -- |
| 327.2 | 0.842 | 5.47 | -- | 1.27 | -1.67 | -- | -- | -1 | 9.68 | 5.817 | 47520 | -- | -- |
| 404.69 | 0.94 | 5.68 | -2.23 | -- | -- | -- | -- | -1.74 | -- | -- | -- | -- | -- |
| 434.5 | 0.975 | 5.59 | -- | 1.3 | -- | -- | -- | -1.5 | 9.87 | -- | -- | -- | -- |
| 423.44 | 0.958 | 5.51 | -- | -- | -1.71 | -- | -- | -0.985 | -- | 3.543 | 47520 | -- | -- |
| 536 | 1.08 | 5.62 | -- | -- | -- | -- | -- | -1.5 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 243.89 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 2 | 246.12 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 3 | 246.14 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 5 | 246.66 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 9 | 247.45 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 10 | 247.64 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 11 | 247.95 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 14 | 248.44 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 17 | 248.99 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 20 | 249.19 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 21 | 249.27 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 22 | 249.46 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 1 | 9 |
| 34 | 249.81 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 36 | 249.82 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 42 | 250.04 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 62 | 250.70 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 64 | 250.83 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 68 | 250.88 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 71 | 250.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 73 | 250.91 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 77 | 250.97 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 90 | 251.22 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 119 | 251.42 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 129 | 251.62 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 143 | 251.87 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 146 | 251.95 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 156 | 252.26 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 164 | 252.37 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 173 | 252.55 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 178 | 252.63 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 196 | 253.06 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 198 | 253.07 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 199 | 253.08 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 216 | 253.31 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 219 | 253.36 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 224 | 253.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 242 | 253.50 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 249 | 253.61 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 257 | 253.73 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 258 | 253.77 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 260 | 253.83 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 261 | 253.90 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 262 | 253.91 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 280 | 254.19 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 2 | 7 |
| 304 | 254.52 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 12 | 22 |
| 325 | 254.66 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 346 | 254.87 | radiation | 20.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 359 | 254.95 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 360 | 254.96 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 375 | 254.98 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 382 | 255.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 386 | 255.03 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 388 | 255.06 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 393 | 255.09 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 397 | 255.11 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 451 | 255.25 | radiation | 40.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 553 | 255.43 | radiation | 40.0 | 43200 | > th | dose independent | no | NA | NA |
| 761 | 255.54 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 794 | 255.59 | radiation | 30.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 816 | 255.62 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 863 | 255.76 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 20 | 2 |
| 871 | 255.79 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 873 | 255.80 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 878 | 255.82 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 6 |
| 903 | 255.86 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 905 | 255.87 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 937 | 255.92 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 9 | 6 |
| 939 | 255.93 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 10 |
| 950 | 255.99 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 959 | 256.00 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 993 | 256.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 1 |