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Os06g0208300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Translation protein SH3-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0109) R2 : 0.00118
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0168 (0.0229) R2dN8 : 0.00152 R2N8 : 0.00118
σ : 0.205
deviance : 19.28
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.77 0.181 13 0.284 0.113 0.273 0.336 -0.368 0.0782 16.6 71.04 929 -- --
14.96 0.18 13 0.255 0.128 0.27 0.394 -- 0.0716 17.1 72 888 -- --
15.05 0.181 13 0.284 0.116 0.25 -- -0.34 0.0774 15.9 71.36 927 -- --
15.25 0.182 13 0.252 0.118 0.252 -- -- 0.0729 16 73 909 -- --
15.61 0.184 13 0.278 -- 0.31 -- -0.361 0.0816 -- 71.98 1033 -- --
16.08 0.188 13 0.255 0.158 -- 0.0527 -- 0.0477 13.5 -- -- -- --
16.09 0.188 13 0.257 0.157 -- -- -- 0.0479 13.3 -- -- -- --
15.81 0.185 13 0.243 -- 0.306 -- -- 0.0762 -- 72.18 1063 -- --
16.87 0.191 13 -- 0.105 0.245 -- -- 0.0477 15.4 76.57 955 -- --
17.62 0.196 13 0.251 -- -- -- -- 0.0446 -- -- -- -- --
17.83 0.198 13 -- 0.153 -- -- -- 0.0193 13.3 -- -- -- --
17.31 0.194 13 -- -- 0.328 -- -- 0.0557 -- 78.26 1072 -- --
19.28 0.205 13 -- -- -- -- -- 0.0168 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.42 humidity 70 720 > th dose dependent rect. 13 17
5 14.46 humidity 80 720 < th dose independent rect. 14 17
11 14.48 radiation 1 720 < th dose independent rect. 16 8
22 14.50 humidity 80 720 > th dose independent rect. 12 19
23 14.51 humidity 80 720 < th dose independent rect. 11 20
27 14.52 humidity 50 720 > th dose dependent rect. 18 6
35 14.54 radiation 10 720 > th dose independent rect. 15 2
50 14.57 radiation 10 720 > th dose independent rect. 15 15
84 14.60 humidity 70 720 > th dose dependent sin 14 NA
85 14.60 radiation 10 720 < th dose dependent rect. 14 10
88 14.61 atmosphere 995 14400 > th dose independent rect. 18 2
98 14.62 humidity 80 720 < th dose independent sin 15 NA
111 14.63 temperature 25 720 > th dose dependent rect. 16 1
114 14.64 humidity 90 720 > th dose independent rect. 20 4
124 14.65 humidity 80 720 < th dose independent rect. 16 1
128 14.65 atmosphere 1005 90 > th dose independent rect. 16 15
133 14.66 humidity 80 720 < th dose independent rect. 15 4
139 14.66 humidity 70 720 > th dose dependent rect. 14 10
164 14.68 temperature 15 270 > th dose dependent rect. 3 8
169 14.69 wind 1 14400 < th dose independent rect. 1 2
170 14.69 temperature 25 90 > th dose independent rect. 16 11
189 14.70 temperature 25 720 > th dose dependent rect. 15 8
196 14.70 humidity 60 720 > th dose dependent rect. 19 11
213 14.71 temperature 20 4320 > th dose independent rect. 20 1
229 14.71 temperature 20 10 > th dose dependent rect. 17 10
232 14.71 humidity 50 720 > th dose dependent rect. 17 14
236 14.72 temperature 20 4320 < th dose independent rect. 20 1
290 14.73 humidity 90 720 < th dose dependent rect. 16 14
294 14.74 temperature 20 720 > th dose independent rect. 12 10
323 14.75 atmosphere 995 14400 < th dose independent rect. 16 1
347 14.75 atmosphere 995 14400 < th dose dependent rect. 16 1
391 14.76 radiation 10 14400 < th dose dependent rect. 20 7
421 14.77 temperature 25 720 > th dose dependent sin 14 NA
427 14.77 temperature 10 90 > th dose dependent rect. 17 10
441 14.78 atmosphere 995 14400 > th dose independent rect. 16 4
447 14.78 atmosphere 995 14400 > th dose independent rect. 12 8
457 14.78 temperature 20 270 > th dose independent rect. 4 19
476 14.78 radiation 10 720 < th dose dependent rect. 11 13
501 14.79 radiation 1 720 > th dose independent rect. 9 20
516 14.80 radiation 1 720 < th dose independent sin 15 NA
517 14.80 atmosphere 995 14400 > th dose independent rect. 16 1
539 14.80 humidity 90 720 > th dose independent rect. 14 10
544 14.80 radiation 1 720 > th dose independent rect. 9 10
587 14.81 temperature 20 720 > th dose independent sin 20 NA
589 14.81 atmosphere 1005 90 > th dose independent sin 12 NA
600 14.81 humidity 80 720 < th dose independent rect. 11 8
623 14.81 humidity 70 720 > th dose dependent rect. 23 1
628 14.81 temperature 15 270 > th dose dependent rect. 17 7
643 14.81 radiation 10 720 < th dose dependent rect. 11 19
644 14.82 humidity 80 720 > th dose independent sin 14 NA
645 14.82 humidity 90 720 > th dose independent rect. 23 1
683 14.82 radiation 10 720 < th dose dependent rect. 13 17
693 14.83 wind 9 4320 < th dose independent rect. 20 5
694 14.83 atmosphere 995 14400 > th dose independent rect. 12 5
707 14.83 temperature 25 90 > th dose independent rect. 16 15
710 14.83 temperature 20 720 > th dose independent rect. 6 18
714 14.83 humidity 90 720 < th dose dependent sin 13 NA
716 14.83 humidity 80 1440 > th dose dependent rect. 14 3
737 14.84 atmosphere 995 14400 > th dose independent rect. 12 3
740 14.84 wind 9 4320 < th dose independent rect. 18 7
741 14.84 temperature 20 4320 < th dose independent rect. 14 8
743 14.84 atmosphere 1005 10 > th dose independent rect. 24 8
773 14.84 humidity 90 720 < th dose dependent rect. 19 9
815 14.85 humidity 80 1440 > th dose independent rect. 13 4
820 14.85 temperature 20 4320 < th dose independent rect. 16 6
895 14.86 wind 1 14400 > th dose independent rect. 1 2
904 14.86 atmosphere 995 14400 > th dose independent rect. 7 7
908 14.86 wind 9 4320 < th dose independent rect. 18 9
934 14.86 humidity 70 1440 > th dose dependent rect. 11 5
935 14.86 radiation 10 14400 < th dose dependent rect. 22 5
956 14.87 radiation 20 4320 > th dose independent rect. 6 1
958 14.87 humidity 80 1440 > th dose independent rect. 15 2
976 14.87 temperature 25 90 < th dose independent rect. 1 10
993 14.87 humidity 70 1440 > th dose dependent rect. 13 1
994 14.87 humidity 80 1440 > th dose dependent rect. 15 1
999 14.87 radiation 10 1440 < th dose dependent rect. 11 3