Os06g0207500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os06g0207500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.61 | 0.417 | 6.51 | -1.66 | 0.586 | 1.49 | 0.256 | -1.32 | -0.253 | 20.9 | 21.69 | 1571 | -- | -- |
| 79.74 | 0.416 | 6.47 | -1.27 | 0.591 | 1.44 | 0.201 | -- | -0.159 | 20.8 | 20.67 | 1561 | -- | -- |
| 78.8 | 0.413 | 6.51 | -1.66 | 0.592 | 1.48 | -- | -1.3 | -0.252 | 20.8 | 21.7 | 1561 | -- | -- |
| 79.82 | 0.416 | 6.47 | -1.3 | 0.608 | 1.44 | -- | -- | -0.16 | 20.6 | 20.4 | 1519 | -- | -- |
| 85.36 | 0.43 | 6.47 | -1.45 | -- | 1.81 | -- | -0.844 | -0.201 | -- | 20.53 | 817 | -- | -- |
| 146.77 | 0.568 | 6.39 | -0.748 | 0.621 | -- | 0.265 | -- | 0.185 | 21.1 | -- | -- | -- | -- |
| 146.99 | 0.568 | 6.39 | -0.756 | 0.622 | -- | -- | -- | 0.185 | 20.9 | -- | -- | -- | -- |
| 86.1 | 0.432 | 6.45 | -1.28 | -- | 1.8 | -- | -- | -0.157 | -- | 19.81 | 818 | -- | -- |
| 118.24 | 0.506 | 6.42 | -- | 0.567 | 1.16 | -- | -- | 0.0455 | 19.5 | 21.9 | 1261 | -- | -- |
| 169.17 | 0.608 | 6.37 | -0.756 | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
| 162.07 | 0.596 | 6.37 | -- | 0.624 | -- | -- | -- | 0.269 | 20.9 | -- | -- | -- | -- |
| 123.71 | 0.518 | 6.4 | -- | -- | 1.42 | -- | -- | 0.0601 | -- | 21.8 | 792 | -- | -- |
| 184.25 | 0.634 | 6.35 | -- | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 2 | 78.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 17 |
| 4 | 78.60 | temperature | 20 | 1440 | > th | dose dependent | sin | 20 | NA |
| 18 | 78.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 66 | 78.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 71 | 78.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 150 | 79.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 167 | 79.38 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 182 | 79.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 193 | 79.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 669 | 81.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 695 | 81.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 722 | 81.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 745 | 81.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 785 | 81.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 886 | 82.32 | temperature | 30 | 1440 | < th | dose dependent | sin | 20 | NA |
| 893 | 82.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |